fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G28470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050969 not found in 313aa AT3G28470.1 1st_1st 0.453834115 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G28470.1     MGRPPCCDKSNVKKGLWTEEEDAKILAYVAIHGVGNWSLIPKKAGLNRCGKSCRLRWTNY
gm050969_Glyma1 MGRPPCCDKSNVKRGLWTPEEDAKILAYVVNHGTGNWTLVPKKAGLNRCGKSCRLRWTNY
                *************:**** **********. **.***:*:********************

AT3G28470.1     LRPDLKHDSFSTQEEELIIECHRAIGSRWSSIARKLPGRTDNDVKNHWNTKLKKKLMKMG
gm050969_Glyma1 LRPDLKHDGFTPQEEELIINLHGAIGSRWSIIAKRLPGRTDNDVKNYWNTKLRKKLMKMG
                ********.*:.*******: * ******* **::***********:*****:*******

AT3G28470.1     IDPVTHKPVSQLLAEFRNISGHGNAS-------------------FKTEPSNNSILTQSN
gm050969_Glyma1 IDPVTHKPVSQVLSDLGSISGLPNTTTNQIAFINKDLMMSNMLPITKTEPSVPS------
                ***********:*::: .***  *::                    *****  *      

AT3G28470.1     SAWEMMRNTTTNHESYYTNSPMMFTNSSEYQTTPFHFYSHPNHLLNGTTSSCSSSSSS--
gm050969_Glyma1 --WE-------HHIPY-----QVIINSENIQS----------HVLSEAASSTSSSSSSNI
                  **       :* .*      :: **.: *:          *:*. ::** ******  

AT3G28470.1     TSITQPN----QVPQT----PVTNFYWSDFLLSDPVPQVVGSSATSDLTFTQNEHHFNIE
gm050969_Glyma1 TQLGSPQSYSCQTPQAQIAPPCSSFDWSEFLQSDSFNWSLNPSS----GIIQSEAELSNN
                *.: .*:    *.**:    * :.* **:** **..   :..*:     : *.* .:. :

AT3G28470.1     AEYISQNIDSKASGTCHSASSFVDEILDKDQEMLSQFPQLLN-DFDY
gm050969_Glyma1 AKSNGNDMQGGASEGSGSAHSFVDGILDRDSEIRAAFPELLDASFDC
                *:  .::::. **  . ** **** ***:*.*: : **:**: .**
BoxShade v3.31 C (beta, 970507) Output
AT3G28470.1     M G R P P C C D K S N V K K G L W T E E E D A K I L A Y V A I H G V G N W S L I P K K A G L N R C G K S C R L R W T N Y
gm050969_Glyma1    M G R P P C C D K S N V K R G L W T P E E D A K I L A Y V V N H G T G N W T L V P K K A G L N R C G K S C R L R W T N Y
 
AT3G28470.1     L R P D L K H D S F S T Q E E E L I I E C H R A I G S R W S S I A R K L P G R T D N D V K N H W N T K L K K K L M K M G
gm050969_Glyma1    L R P D L K H D G F T P Q E E E L I I N L H G A I G S R W S I I A K R L P G R T D N D V K N Y W N T K L R K K L M K M G
 
AT3G28470.1     I D P V T H K P V S Q L L A E F R N I S G H G N A S - - - - - - - - - - - - - - - - - - - F K T E P S N N S I L T Q S N
gm050969_Glyma1    I D P V T H K P V S Q V L S D L G S I S G L P N T T T N Q I A F I N K D L M M S N M L P I T K T E P S V P S - - - - - -
 
AT3G28470.1     S A W E M M R N T T T N H E S Y Y T N S P M M F T N S S E Y Q T T P F H F Y S H P N H L L N G T T S S C S S S S S S - -
gm050969_Glyma1    - - W E - - - - - - - H H I P Y - - - - - Q V I I N S E N I Q S - - - - - - - - - - H V L S E A A S S T S S S S S S N I
 
AT3G28470.1     T S I T Q P N - - - - Q V P Q T - - - - P V T N F Y W S D F L L S D P V P Q V V G S S A T S D L T F T Q N E H H F N I E
gm050969_Glyma1    T Q L G S P Q S Y S C Q T P Q A Q I A P P C S S F D W S E F L Q S D S F N W S L N P S S - - - - G I I Q S E A E L S N N
 
AT3G28470.1     A E Y I S Q N I D S K A S G T C H S A S S F V D E I L D K D Q E M L S Q F P Q L L N - D F D Y
gm050969_Glyma1    A K S N G N D M Q G G A S E G S G S A H S F V D G I L D R D S E I R A A F P E L L D A S F D C
 
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