fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G28470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050969 not found in 313aa AT3G28470.1 1st_1st 0.453834115 Ia
Gm035012 not found in 314aa AT3G28470.1 not_1st 0.452269170 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G28470.1     MGRPPCCDKSNVKKGLWTEEEDAKILAYVAIHGVGNWSLIPKKAGLNRCGKSCRLRWTNY
gm050969_Glyma1 MGRPPCCDKSNVKRGLWTPEEDAKILAYVVNHGTGNWTLVPKKAGLNRCGKSCRLRWTNY
gm035012_Glyma1 MGRPPCCDKSNVKRGLWTPEEDAKILAYVANHGTGNWTLVPKKAGLNRCGKSCRLRWTNY
                *************:**** **********. **.***:*:********************

AT3G28470.1     LRPDLKHDSFSTQEEELIIECHRAIGSRWSSIARKLPGRTDNDVKNHWNTKLKKKLMKMG
gm050969_Glyma1 LRPDLKHDGFTPQEEELIINLHGAIGSRWSIIAKRLPGRTDNDVKNYWNTKLRKKLMKMG
gm035012_Glyma1 LRPDLKHDGFTPQEEDLIINLHGAIGSRWSLIAKRLPGRTDNDVKNYWNTKLRKKLMKMG
                ********.*:.***:***: * ******* **::***********:*****:*******

AT3G28470.1     IDPVTHKPVSQLLAEFRNISGHGNASFKTEPSNNSILTQSNSAWEMMRNTTTNHESYYTN
gm050969_Glyma1 IDPVTHKPVSQVLSDLGSISG-------------------------LPNTTTNQIA-FIN
gm035012_Glyma1 IDPVTHKPVSQVLSDLGSISG-------------------------LPN-TTNQMA-FIN
                ***********:*::: .***                         : * ***: : : *

AT3G28470.1     SPMMFTNS-SEYQTTPF----HFYSH-------------PNHLLNGTTSSCSSSSSS--T
gm050969_Glyma1 KDLMMSNMLPITKTEPSVPS---WEHHIPYQVIINSENIQSHVLSEAASSTSSSSSSNIT
gm035012_Glyma1 KDLMMSNM-PPTKTEPSDSNKSMVEH--TQEVIINSENVQPQVLSEAASSTSSSSSSNLT
                . :*::*  .  :* *        .*               ::*. ::** ******  *

AT3G28470.1     SITQPN----QVPQT----PVTNFYWSDFLLSD-------PVPQVVGSSATSDLTFTQNE
gm050969_Glyma1 QLGSPQSYSCQTPQAQIAPPCSSFDWSEFLQSDSFNWSLNPSSGIIQSEAELSNNAKSNG
gm035012_Glyma1 QLGSPQSYSCQTPQAQISPPCSSFDWSEFLHSDSFNWSLNPPSGLMQSEAELSDNTKSNG
                .: .*:    *.**:    * :.* **:** **       * . :: *.*  . . ..* 

AT3G28470.1     HHFNIEAEYISQNIDSK--ASGTCHSASSFVDEILDKDQEMLSQFPQLLN-DFDY
gm050969_Glyma1 NDM--------QGGASE--GSGSAH---SFVDGILDRDSEIRAAFPELLDASFDC
gm035012_Glyma1 HDM--------QGAASEGSGSGSAH---SFVDGILDRDSEIRAAFPQLLDASFDY
                :.:        *.  *:  .**:.*   **** ***:*.*: : **:**: .**
BoxShade v3.31 C (beta, 970507) Output
AT3G28470.1     M G R P P C C D K S N V K K G L W T E E E D A K I L A Y V A I H G V G N W S L I P K K A G L N R C G K S C R L R W T N Y
gm050969_Glyma1    M G R P P C C D K S N V K R G L W T P E E D A K I L A Y V V N H G T G N W T L V P K K A G L N R C G K S C R L R W T N Y
gm035012_Glyma1    M G R P P C C D K S N V K R G L W T P E E D A K I L A Y V A N H G T G N W T L V P K K A G L N R C G K S C R L R W T N Y
 
AT3G28470.1     L R P D L K H D S F S T Q E E E L I I E C H R A I G S R W S S I A R K L P G R T D N D V K N H W N T K L K K K L M K M G
gm050969_Glyma1    L R P D L K H D G F T P Q E E E L I I N L H G A I G S R W S I I A K R L P G R T D N D V K N Y W N T K L R K K L M K M G
gm035012_Glyma1    L R P D L K H D G F T P Q E E D L I I N L H G A I G S R W S L I A K R L P G R T D N D V K N Y W N T K L R K K L M K M G
 
AT3G28470.1     I D P V T H K P V S Q L L A E F R N I S G H G N A S F K T E P S N N S I L T Q S N S A W E M M R N T T T N H E S Y Y T N
gm050969_Glyma1    I D P V T H K P V S Q V L S D L G S I S G - - - - - - - - - - - - - - - - - - - - - - - - - L P N T T T N Q I A - F I N
gm035012_Glyma1    I D P V T H K P V S Q V L S D L G S I S G - - - - - - - - - - - - - - - - - - - - - - - - - L P N - T T N Q M A - F I N
 
AT3G28470.1     S P M M F T N S - S E Y Q T T P F - - - - H F Y S H - - - - - - - - - - - - - P N H L L N G T T S S C S S S S S S - - T
gm050969_Glyma1    K D L M M S N M L P I T K T E P S V P S - - - W E H H I P Y Q V I I N S E N I Q S H V L S E A A S S T S S S S S S N I T
gm035012_Glyma1    K D L M M S N M - P P T K T E P S D S N K S M V E H - - T Q E V I I N S E N V Q P Q V L S E A A S S T S S S S S S N L T
 
AT3G28470.1     S I T Q P N - - - - Q V P Q T - - - - P V T N F Y W S D F L L S D - - - - - - - P V P Q V V G S S A T S D L T F T Q N E
gm050969_Glyma1    Q L G S P Q S Y S C Q T P Q A Q I A P P C S S F D W S E F L Q S D S F N W S L N P S S G I I Q S E A E L S N N A K S N G
gm035012_Glyma1    Q L G S P Q S Y S C Q T P Q A Q I S P P C S S F D W S E F L H S D S F N W S L N P P S G L M Q S E A E L S D N T K S N G
 
AT3G28470.1     H H F N I E A E Y I S Q N I D S K - - A S G T C H S A S S F V D E I L D K D Q E M L S Q F P Q L L N - D F D Y
gm050969_Glyma1    N D M - - - - - - - - Q G G A S E - - G S G S A H - - - S F V D G I L D R D S E I R A A F P E L L D A S F D C
gm035012_Glyma1    H D M - - - - - - - - Q G A A S E G S G S G S A H - - - S F V D G I L D R D S E I R A A F P Q L L D A S F D Y
 
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