fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G28917.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp005122 not found in 340aa AT1G75240.1 1st_not 0.649681528 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G28917.1     ----------------------MRKRQVVLRRASP-------------------------
pp005122_Pp1s23 MDLGSGRDGTDQQQQQQRGPHQTQQQQQQLPQPQPLASLPTSIPLLLPPALAVSNYHPTP
                                       :::*  * :..*                         

AT3G28917.1     -----------EEP-------------------SRS---------------------SST
pp005122_Pp1s23 VSVQPQHQQHHEMPGAAKPKLLNTPSGNGGSVQSKSDHVAADQAREIVRQAVQVAGAASE
                           * *                   *:*                     :* 

AT3G28917.1     ASSLTVRTV-----RYGECQKNHAAAVGGYAVDGCREFMASRGEEGTVAALTCAACGCHR
pp005122_Pp1s23 SASAKLSNVKKGAFRYRECQKNHAASIGGHALDGCGEFMPG-GQEGTVGALRCAACDCHR
                ::* .: .*     ** ********::**:*:*** ***.. *:****.** ****.***

AT3G28917.1     SFHRREIETEVVCDCNS---------------------------------PPSTGN----
pp005122_Pp1s23 NFHRREVEGEVLCECKRKPKPGMQLGAGIVTPHQLPGGTNTSTPMGALALPPSAGAMTPL
                .*****:* **:*:*:                                  ***:*     

AT3G28917.1     ------------------------------------------------------------
pp005122_Pp1s23 TTAALSAGGLTDSDEQDDGLGNSAGGMMISMRSPSAIKKRFRTKFSTEQKDQMCAFAEEL
                                                                            

AT3G28917.1     -----------------------------------------
pp005122_Pp1s23 GWRIQKHDEAAVQEFCTTVGVKRHVLKVWMHNNKHTVGKKP
BoxShade v3.31 C (beta, 970507) Output
AT3G28917.1     - - - - - - - - - - - - - - - - - - - - - - M R K R Q V V L R R A S P - - - - - - - - - - - - - - - - - - - - - - - - -
pp005122_Pp1s23    M D L G S G R D G T D Q Q Q Q Q Q R G P H Q T Q Q Q Q Q Q L P Q P Q P L A S L P T S I P L L L P P A L A V S N Y H P T P
 
AT3G28917.1     - - - - - - - - - - - E E P - - - - - - - - - - - - - - - - - - - S R S - - - - - - - - - - - - - - - - - - - - - S S T
pp005122_Pp1s23    V S V Q P Q H Q Q H H E M P G A A K P K L L N T P S G N G G S V Q S K S D H V A A D Q A R E I V R Q A V Q V A G A A S E
 
AT3G28917.1     A S S L T V R T V - - - - - R Y G E C Q K N H A A A V G G Y A V D G C R E F M A S R G E E G T V A A L T C A A C G C H R
pp005122_Pp1s23    S A S A K L S N V K K G A F R Y R E C Q K N H A A S I G G H A L D G C G E F M P G - G Q E G T V G A L R C A A C D C H R
 
AT3G28917.1     S F H R R E I E T E V V C D C N S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P P S T G N - - - -
pp005122_Pp1s23    N F H R R E V E G E V L C E C K R K P K P G M Q L G A G I V T P H Q L P G G T N T S T P M G A L A L P P S A G A M T P L
 
AT3G28917.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp005122_Pp1s23    T T A A L S A G G L T D S D E Q D D G L G N S A G G M M I S M R S P S A I K K R F R T K F S T E Q K D Q M C A F A E E L
 
AT3G28917.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp005122_Pp1s23    G W R I Q K H D E A A V Q E F C T T V G V K R H V L K V W M H N N K H T V G K K P
 
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