fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G28917.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019485 not found in 130aa AT3G28917.1 not_1st 0.808917197 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G28917.1     -----------------------------------MRKRQVVLRRASPEEPSRSSSTASS
pt019485_POPTR_ MPASNYRSVFQLESSSLVYQGFERGEGSVELGTSKMRKRQVAVRRT--EEPSRSSTT--S
                                                   ******.:**:  *******:*  *

AT3G28917.1     LTVRTVRYGECQKNHAAAVGGYAVDGCREFMASRGEEGTVAALTCAACGCHRSFHRREIE
pt019485_POPTR_ FTIRNVKYGECLKNHAASVGGYAVDGCREFMAS-GEEGTADALTCAACGCHRNFHRREVE
                :*:*.*:**** *****:*************** *****. ***********.*****:*

AT3G28917.1     TEVVCDCNSPPSTGN
pt019485_POPTR_ TEVICDCSSPSSNGN
                ***:***.**.*.**
BoxShade v3.31 C (beta, 970507) Output
AT3G28917.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M R K R Q V V L R R A S P E E P S R S S S T A S S
pt019485_POPTR_    M P A S N Y R S V F Q L E S S S L V Y Q G F E R G E G S V E L G T S K M R K R Q V A V R R T - - E E P S R S S T T - - S
 
AT3G28917.1     L T V R T V R Y G E C Q K N H A A A V G G Y A V D G C R E F M A S R G E E G T V A A L T C A A C G C H R S F H R R E I E
pt019485_POPTR_    F T I R N V K Y G E C L K N H A A S V G G Y A V D G C R E F M A S - G E E G T A D A L T C A A C G C H R N F H R R E V E
 
AT3G28917.1     T E V V C D C N S P P S T G N
pt019485_POPTR_    T E V I C D C S S P S S N G N
 
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