fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G28917.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt003370 not found in 156aa AT3G28917.1 1st_1st 0.847133757 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G28917.1     ------------------------------------------------------------
pt003370_POPTR_ MEGLYISVTTKSNFLLLSLLPLSIFTPYSNYRSVFQLENSSLAYQGFEGEGSGEELGTSQ
                                                                            

AT3G28917.1     MRKRQVVLRRASPEEPSRSSSTASSLTVRTVRYGECQKNHAAAVGGYAVDGCREFMASRG
pt003370_POPTR_ MRKRQVVVRRS--EEPSRSSTT-SSFTIRNVKYGECQKNHAAGVGGYAVDGCREFMAS-G
                *******:**:  *******:* **:*:*.*:**********.*************** *

AT3G28917.1     EEGTVAALTCAACGCHRSFHRREIETEVVCDCNSPPSTGN
pt003370_POPTR_ EEGTAAALTCAACGCHRNFHRREVETEVACDCSSPSSNGN
                ****.************.*****:****.***.**.*.**
BoxShade v3.31 C (beta, 970507) Output
AT3G28917.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt003370_POPTR_    M E G L Y I S V T T K S N F L L L S L L P L S I F T P Y S N Y R S V F Q L E N S S L A Y Q G F E G E G S G E E L G T S Q
 
AT3G28917.1     M R K R Q V V L R R A S P E E P S R S S S T A S S L T V R T V R Y G E C Q K N H A A A V G G Y A V D G C R E F M A S R G
pt003370_POPTR_    M R K R Q V V V R R S - - E E P S R S S T T - S S F T I R N V K Y G E C Q K N H A A G V G G Y A V D G C R E F M A S - G
 
AT3G28917.1     E E G T V A A L T C A A C G C H R S F H R R E I E T E V V C D C N S P P S T G N
pt003370_POPTR_    E E G T A A A L T C A A C G C H R N F H R R E V E T E V A C D C S S P S S N G N
 
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