fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G28917.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm015752 not found in 89aa AT1G18835.1 1st_not 0.713375796 II
Gm051011 not found in 97aa AT3G28917.1 not_1st 0.681528662 II
Gm035045 not found in 82aa AT3G28917.1 not_1st 0.624203821 II
Gm011048 not found in 79aa AT3G28917.1 not_1st 0.617834394 II
Gm025828 not found in 93aa AT3G28917.1 not_1st 0.573248407 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G28917.1     MRKRQVVLRRASPEEPSRSSSTASSLTVRTVRYGECQKNHAAAVGGYAVDGCREFMAS--
gm015752_Glyma0 MKKRQVVVKS---VANTSSSV------MRNIRYGECQKNHAANIGGYAVDGCREFMAS--
gm025828_Glyma0 ----MTLMGR---NGPQRCPNNALVTIVRYVRYRDCRRNHVCHLGGHTVDGCTEFIPS--
gm051011_Glyma1 MRKRQVVVRR---EEPQRSG-------VRAVKYGECQKNHAANVGGYAVDGCREFMASGS
gm011048_Glyma0 MKKRQVVVKR---DYATSSPA------VGNIRYGECQKNHAANTGGYAVDGCREFMAS--
gm035045_Glyma1 MRKRQVVVRR---EEPQRSA--------RTVKYGECQKNHAANVGGYAVDGCREFMASGA
                     .::          .           ::* :*::**..  **::**** **:.*  

AT3G28917.1     ------RGEEGTVAALTCAACGCHRSFHRR---EIETEVVCDCNSPPSTGN-
gm015752_Glyma0 -------TGEGAGGALTCAACGCHRNFHRR---EVNTEVVCE-YSPPNSGR-
gm025828_Glyma0 -------GSEGTDTALICAACGCHRNFHRR---EEYSQLVCGCTSHPSTSGA
gm051011_Glyma1 GSGGGSGGGEGTSAALTCAACGCHRNFHKRQEAEVVSECS----SPTSNGT-
gm011048_Glyma0 -------AGEGTNAALTCAACGCHRNFHKR---EVLHGVN------------
gm035045_Glyma1 -------TGEGTSAALTCAACGCHRNFHKRQETEVVNHII------------
                         **:  ** ********.**:*   *
BoxShade v3.31 C (beta, 970507) Output
AT3G28917.1     M R K R Q V V L R R A S P E E P S R S S S T A S S L T V R T V R Y G E C Q K N H A A A V G G Y A V D G C R E F M A S - -
gm015752_Glyma0    M K K R Q V V V K S - - - V A N T S S S V - - - - - - M R N I R Y G E C Q K N H A A N I G G Y A V D G C R E F M A S - -
gm025828_Glyma0    - - - - M T L M G R - - - N G P Q R C P N N A L V T I V R Y V R Y R D C R R N H V C H L G G H T V D G C T E F I P S - -
gm051011_Glyma1    M R K R Q V V V R R - - - E E P Q R S G - - - - - - - V R A V K Y G E C Q K N H A A N V G G Y A V D G C R E F M A S G S
gm011048_Glyma0    M K K R Q V V V K R - - - D Y A T S S P A - - - - - - V G N I R Y G E C Q K N H A A N T G G Y A V D G C R E F M A S - -
gm035045_Glyma1    M R K R Q V V V R R - - - E E P Q R S A - - - - - - - - R T V K Y G E C Q K N H A A N V G G Y A V D G C R E F M A S G A
 
AT3G28917.1     - - - - - - R G E E G T V A A L T C A A C G C H R S F H R R - - - E I E T E V V C D C N S P P S T G N -
gm015752_Glyma0    - - - - - - - T G E G A G G A L T C A A C G C H R N F H R R - - - E V N T E V V C E - Y S P P N S G R -
gm025828_Glyma0    - - - - - - - G S E G T D T A L I C A A C G C H R N F H R R - - - E E Y S Q L V C G C T S H P S T S G A
gm051011_Glyma1    G S G G G S G G G E G T S A A L T C A A C G C H R N F H K R Q E A E V V S E C S - - - - S P T S N G T -
gm011048_Glyma0    - - - - - - - A G E G T N A A L T C A A C G C H R N F H K R - - - E V L H G V N - - - - - - - - - - - -
gm035045_Glyma1    - - - - - - - T G E G T S A A L T C A A C G C H R N F H K R Q E T E V V N H I I - - - - - - - - - - - -
 
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