fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G28920.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035046 not found in 331aa AT3G28920.1 1st_1st 0.517241379 Ia
Pt004187 not found in 340aa AT3G28920.1 1st_1st 0.525198938 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G28920.1     MLEVRSMDM------------------TPKSPEPESETPTRIQ-----PAKPISFSNGII
gm035046_Glyma1 ------MEI----ITPTATATNA----TAKSPEPDIETMTRIHQNPNPNPKPVSFSNGVL
pt004187_POPTR_ ------MDMTTTTTTPTPTNNNNTNTPTPKSPEAYTETPARIH-----DTKPLSFTNGVL
                      *::                  *.****.  ** :**:      .**:**:**::

AT3G28920.1     KRH--HHHHHNNNK-------VTYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSL
gm035046_Glyma1 KRH------HVNHRAA-----VVYKECLKNHVASLGGHALDGCGEFMPSPAATADDPSSI
pt004187_POPTR_ KRHPPHHHHHHHHHFSPSPIVIAYKECLKNHAATIGGHALDGCGEFMPSPIATHTNPTSL
                ***      * :::       :.********.*::*************** :*  :*:*:

AT3G28920.1     KCAACGCHRNFHRRETDDSSAVPPPSLLPSSTTTAAIEYQPHHRHHP-PPPLAPPLPR-S
gm035046_Glyma1 KCAACGCHRNFHRREPEESP--------ISPATHHVLEYRPHHRHHP-PPP-----HR-S
pt004187_POPTR_ KCAACGCHRNFHRREPEDSP--------PHTATTTTIQYQSHHRHHPLPPPQAQPLHNGS
                ***************.::*.          .:*  .::*:.****** ***      . *

AT3G28920.1     PNSSSPPPISSSY------MLLALSGNNKTAPFSDLNFAAAAN---HLSATPG----SRK
gm035046_Glyma1 PNSASPPPI-SSY-PSAPHMLLALSGG------------AGLSVAPENTAAPAPPHHSRK
pt004187_POPTR_ PNSASPPPISSSYYPSGPHMLLALSGG-----VSGLNENANINVPPPVGSSP------RK
                ***:***** ***      *******.            *  .      ::*      **

AT3G28920.1     RFRTKFSSNQKEKMHEFADRIGWKIQKRDEDEVRDFCREIGVDKGVLKVWMHNNKNSF--
gm035046_Glyma1 RFRTKFTQEQKEKMHEFADKVGWKMQRRDEEMVMEFCNEIGVDRGVLKVWMHNNKNTFAK
pt004187_POPTR_ RFRTKFSQSQKERMYQFAERVGWKMQKRDEDLVQEFCNEVGVDRGVLKVWMHNNKNSLGK
                ******:..***:*::**:::***:*:***: * :**.*:***:************::  

AT3G28920.1     -KFSGGGA------------------------TTVQRNDNGIGGENSNDDGVRGLANDGD
gm035046_Glyma1 KDNLNGNSIGNVAIVSANGVAPIGAVGSATVRSSVHVHEHEHGGINGNGSGDN---NHNP
pt004187_POPTR_ KEHLNGNN------------------------NDILRSNNLENSDNSNNEANKNITNDNN
                 .  .*.                         . :   ::  .. *.*... .   *.. 

AT3G28920.1     GGG---------GRFESDSG-GADGGGNVNASSSSS
gm035046_Glyma1 LGSRDV------NEYENDS--GTNGGGGTNGSSSSS
pt004187_POPTR_ NGSEGLNHHHNHHHFENESHVGVHVG--TNGSSSSS
                 *.          .:*.:*  *.. *  .*.*****
BoxShade v3.31 C (beta, 970507) Output
AT3G28920.1     M L E V R S M D M - - - - - - - - - - - - - - - - - - T P K S P E P E S E T P T R I Q - - - - - P A K P I S F S N G I I
gm035046_Glyma1    - - - - - - M E I - - - - I T P T A T A T N A - - - - T A K S P E P D I E T M T R I H Q N P N P N P K P V S F S N G V L
pt004187_POPTR_    - - - - - - M D M T T T T T T P T P T N N N N T N T P T P K S P E A Y T E T P A R I H - - - - - D T K P L S F T N G V L
 
AT3G28920.1     K R H - - H H H H H N N N K - - - - - - - V T Y K E C L K N H A A A I G G H A L D G C G E F M P S P S S T P S D P T S L
gm035046_Glyma1    K R H - - - - - - H V N H R A A - - - - - V V Y K E C L K N H V A S L G G H A L D G C G E F M P S P A A T A D D P S S I
pt004187_POPTR_    K R H P P H H H H H H H H H F S P S P I V I A Y K E C L K N H A A T I G G H A L D G C G E F M P S P I A T H T N P T S L
 
AT3G28920.1     K C A A C G C H R N F H R R E T D D S S A V P P P S L L P S S T T T A A I E Y Q P H H R H H P - P P P L A P P L P R - S
gm035046_Glyma1    K C A A C G C H R N F H R R E P E E S P - - - - - - - - I S P A T H H V L E Y R P H H R H H P - P P P - - - - - H R - S
pt004187_POPTR_    K C A A C G C H R N F H R R E P E D S P - - - - - - - - P H T A T T T T I Q Y Q S H H R H H P L P P P Q A Q P L H N G S
 
AT3G28920.1     P N S S S P P P I S S S Y - - - - - - M L L A L S G N N K T A P F S D L N F A A A A N - - - H L S A T P G - - - - S R K
gm035046_Glyma1    P N S A S P P P I - S S Y - P S A P H M L L A L S G G - - - - - - - - - - - - A G L S V A P E N T A A P A P P H H S R K
pt004187_POPTR_    P N S A S P P P I S S S Y Y P S G P H M L L A L S G G - - - - - V S G L N E N A N I N V P P P V G S S P - - - - - - R K
 
AT3G28920.1     R F R T K F S S N Q K E K M H E F A D R I G W K I Q K R D E D E V R D F C R E I G V D K G V L K V W M H N N K N S F - -
gm035046_Glyma1    R F R T K F T Q E Q K E K M H E F A D K V G W K M Q R R D E E M V M E F C N E I G V D R G V L K V W M H N N K N T F A K
pt004187_POPTR_    R F R T K F S Q S Q K E R M Y Q F A E R V G W K M Q K R D E D L V Q E F C N E V G V D R G V L K V W M H N N K N S L G K
 
AT3G28920.1     - K F S G G G A - - - - - - - - - - - - - - - - - - - - - - - - T T V Q R N D N G I G G E N S N D D G V R G L A N D G D
gm035046_Glyma1    K D N L N G N S I G N V A I V S A N G V A P I G A V G S A T V R S S V H V H E H E H G G I N G N G S G D N - - - N H N P
pt004187_POPTR_    K E H L N G N N - - - - - - - - - - - - - - - - - - - - - - - - N D I L R S N N L E N S D N S N N E A N K N I T N D N N
 
AT3G28920.1     G G G - - - - - - - - - G R F E S D S G - G A D G G G N V N A S S S S S
gm035046_Glyma1    L G S R D V - - - - - - N E Y E N D S - - G T N G G G G T N G S S S S S
pt004187_POPTR_    N G S E G L N H H H N H H H F E N E S H V G V H V G - - T N G S S S S S
 
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