fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G28920.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt004187 not found in 340aa AT3G28920.1 1st_1st 0.525198938 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G28920.1     MLEVRSMDM------------------TPKSPEPESETPTRIQPAKPISFSNGIIKRH--
pt004187_POPTR_ ------MDMTTTTTTPTPTNNNNTNTPTPKSPEAYTETPARIHDTKPLSFTNGVLKRHPP
                      ***                  ******. :***:**: :**:**:**::***  

AT3G28920.1     HHHHHNNNK-------VTYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAAC
pt004187_POPTR_ HHHHHHHHHFSPSPIVIAYKECLKNHAATIGGHALDGCGEFMPSPIATHTNPTSLKCAAC
                *****::::       ::**********:**************** :* ::*********

AT3G28920.1     GCHRNFHRRETDDSSAVPPPSLLPSSTTTAAIEYQPHHRHHP-PPPLAPPLPR-SPNSSS
pt004187_POPTR_ GCHRNFHRREPEDSP--------PHTATTTTIQYQSHHRHHPLPPPQAQPLHNGSPNSAS
                **********.:**.        * ::**::*:**.****** *** * ** . ****:*

AT3G28920.1     PPPISSSY------MLLALSGNNKTAPFSDLNFAAAAN---HLSATPGSRKRFRTKFSSN
pt004187_POPTR_ PPPISSSYYPSGPHMLLALSGG-----VSGLNENANINVPPPVGSSP--RKRFRTKFSQS
                ********      *******.     .*.**  *  *    :.::*  *********..

AT3G28920.1     QKEKMHEFADRIGWKIQKRDEDEVRDFCREIGVDKGVLKVWMHNNKNSF---KFSGGGAT
pt004187_POPTR_ QKERMYQFAERVGWKMQKRDEDLVQEFCNEVGVDRGVLKVWMHNNKNSLGKKEHLNGNNN
                ***:*::**:*:***:****** *::**.*:***:*************:   :. .*. .

AT3G28920.1     TVQRNDNGIGGENSNDDGVRGLANDGDGGG---------GRFESDSG-GADGGGNVNASS
pt004187_POPTR_ DILRSNNLENSDNSNNEANKNITNDNNNGSEGLNHHHNHHHFENESHVGVHVG--TNGSS
                 : *.:*  ..:***::. :.::**.:.*.          :**.:*  *.. *  .*.**

AT3G28920.1     SSS
pt004187_POPTR_ SSS
                ***
BoxShade v3.31 C (beta, 970507) Output
AT3G28920.1     M L E V R S M D M - - - - - - - - - - - - - - - - - - T P K S P E P E S E T P T R I Q P A K P I S F S N G I I K R H - -
pt004187_POPTR_    - - - - - - M D M T T T T T T P T P T N N N N T N T P T P K S P E A Y T E T P A R I H D T K P L S F T N G V L K R H P P
 
AT3G28920.1     H H H H H N N N K - - - - - - - V T Y K E C L K N H A A A I G G H A L D G C G E F M P S P S S T P S D P T S L K C A A C
pt004187_POPTR_    H H H H H H H H H F S P S P I V I A Y K E C L K N H A A T I G G H A L D G C G E F M P S P I A T H T N P T S L K C A A C
 
AT3G28920.1     G C H R N F H R R E T D D S S A V P P P S L L P S S T T T A A I E Y Q P H H R H H P - P P P L A P P L P R - S P N S S S
pt004187_POPTR_    G C H R N F H R R E P E D S P - - - - - - - - P H T A T T T T I Q Y Q S H H R H H P L P P P Q A Q P L H N G S P N S A S
 
AT3G28920.1     P P P I S S S Y - - - - - - M L L A L S G N N K T A P F S D L N F A A A A N - - - H L S A T P G S R K R F R T K F S S N
pt004187_POPTR_    P P P I S S S Y Y P S G P H M L L A L S G G - - - - - V S G L N E N A N I N V P P P V G S S P - - R K R F R T K F S Q S
 
AT3G28920.1     Q K E K M H E F A D R I G W K I Q K R D E D E V R D F C R E I G V D K G V L K V W M H N N K N S F - - - K F S G G G A T
pt004187_POPTR_    Q K E R M Y Q F A E R V G W K M Q K R D E D L V Q E F C N E V G V D R G V L K V W M H N N K N S L G K K E H L N G N N N
 
AT3G28920.1     T V Q R N D N G I G G E N S N D D G V R G L A N D G D G G G - - - - - - - - - G R F E S D S G - G A D G G G N V N A S S
pt004187_POPTR_    D I L R S N N L E N S D N S N N E A N K N I T N D N N N G S E G L N H H H N H H H F E N E S H V G V H V G - - T N G S S
 
AT3G28920.1     S S S
pt004187_POPTR_    S S S
 
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