fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G28920.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023270 not found in 553aa AT3G28920.1 1st_1st 0.251989389 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G28920.1     -----MLEVRSMDMTPKSPEPES-------------------ETPTRIQPAKPISFSNGI
Sb023270_Sorbi1 GSYGRQVQARHV---PQRRRPQEGSKAGGRGAGRGAAVPGVPQEPRR-QPGRP---RRGR
                      ::.* :   *:  .*:.                   : * * **.:*    .* 

AT3G28920.1     IKRHHHHHHNNNKVTYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCH
Sb023270_Sorbi1 VRRV-------------------------HAL---------PRGQPRRPDVAQV------
                ::*                          ***         * . *  *   :       

AT3G28920.1     RNFHRRETDDSSAVPPPS---LLPSSTTTAAIEYQPHHRHHPPPPLAPPLPRSPNSSSPP
Sb023270_Sorbi1 -----RRVRVPPQLPPPDAGGLTPAAACARAAGAPAAGERADARPSAP--RRGGDARGPT
                     *..  .. :***.   * *::: : *    .  .:  . * **   *. :: .*.

AT3G28920.1     PISSSYMLLALSGNNKTAPFSDLNFAAAANHLSATPGSRKRFRTKFSSNQKEKMHEFADR
Sb023270_Sorbi1 P----------------------------------PGRRRRRRLRF-------------R
                *                                  ** *:* * :*             *

AT3G28920.1     IGWKIQKRDEDEVRDFCREIGVDKGVLKVWMHNNKNSF---KFSGGGATT----------
Sb023270_Sorbi1 LG----------------GLGVRRGAVGVPAPSPARAVAPPRAGAGGAAAPALLRDGAAH
                :*                 :** :*.: *   .  .:.   : ..***::          

AT3G28920.1     -----VQRNDNGIGGENSNDDGVRGLANDGD----------GGG---GRFESDS------
Sb023270_Sorbi1 AALAWLRRRARGRGGSGR----VRGAEAAGPSTPAADAVQRAAGPRRGRRDADAPEAVPH
                     ::*. .* **..     ***    *           ..*   ** ::*:      

AT3G28920.1     ----------GGADGGGNVNASSSSS----------------------------------
Sb023270_Sorbi1 QVHRRAEAADAGAVGAARVAAAEARRGHRRRVVPRHRRRQGRLQGLDAQQQAQLPGRPQR
                          .** *...* *:.:                                    

AT3G28920.1     ------------------------------------------------------------
Sb023270_Sorbi1 PPQRLSLRLRRRLRAAPNPRRRCCTVVIQPVQDHPSASRPHLFPDQRHRLQHQRRRLLGA
                                                                            

AT3G28920.1     ------------------------
Sb023270_Sorbi1 HRRHRRPHGQRRQRSFIAAVRLNY
BoxShade v3.31 C (beta, 970507) Output
AT3G28920.1     - - - - - M L E V R S M D M T P K S P E P E S - - - - - - - - - - - - - - - - - - - E T P T R I Q P A K P I S F S N G I
Sb023270_Sorbi1    G S Y G R Q V Q A R H V - - - P Q R R R P Q E G S K A G G R G A G R G A A V P G V P Q E P R R - Q P G R P - - - R R G R
 
AT3G28920.1     I K R H H H H H H N N N K V T Y K E C L K N H A A A I G G H A L D G C G E F M P S P S S T P S D P T S L K C A A C G C H
Sb023270_Sorbi1    V R R V - - - - - - - - - - - - - - - - - - - - - - - - - H A L - - - - - - - - - P R G Q P R R P D V A Q V - - - - - -
 
AT3G28920.1     R N F H R R E T D D S S A V P P P S - - - L L P S S T T T A A I E Y Q P H H R H H P P P P L A P P L P R S P N S S S P P
Sb023270_Sorbi1    - - - - - R R V R V P P Q L P P P D A G G L T P A A A C A R A A G A P A A G E R A D A R P S A P - - R R G G D A R G P T
 
AT3G28920.1     P I S S S Y M L L A L S G N N K T A P F S D L N F A A A A N H L S A T P G S R K R F R T K F S S N Q K E K M H E F A D R
Sb023270_Sorbi1    P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P G R R R R R R L R F - - - - - - - - - - - - - R
 
AT3G28920.1     I G W K I Q K R D E D E V R D F C R E I G V D K G V L K V W M H N N K N S F - - - K F S G G G A T T - - - - - - - - - -
Sb023270_Sorbi1    L G - - - - - - - - - - - - - - - - G L G V R R G A V G V P A P S P A R A V A P P R A G A G G A A A P A L L R D G A A H
 
AT3G28920.1     - - - - - V Q R N D N G I G G E N S N D D G V R G L A N D G D - - - - - - - - - - G G G - - - G R F E S D S - - - - - -
Sb023270_Sorbi1    A A L A W L R R R A R G R G G S G R - - - - V R G A E A A G P S T P A A D A V Q R A A G P R R G R R D A D A P E A V P H
 
AT3G28920.1     - - - - - - - - - - G G A D G G G N V N A S S S S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb023270_Sorbi1    Q V H R R A E A A D A G A V G A A R V A A A E A R R G H R R R V V P R H R R R Q G R L Q G L D A Q Q Q A Q L P G R P Q R
 
AT3G28920.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb023270_Sorbi1    P P Q R L S L R L R R R L R A A P N P R R R C C T V V I Q P V Q D H P S A S R P H L F P D Q R H R L Q H Q R R R L L G A
 
AT3G28920.1     - - - - - - - - - - - - - - - - - - - - - - - -
Sb023270_Sorbi1    H R R H R R P H G Q R R Q R S F I A A V R L N Y
 
0