fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G28920.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050382 not found in 308aa AT3G28920.1 not_1st 0.511936339 II
Gm025827 not found in 308aa AT3G28920.1 not_1st 0.416445623 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G28920.1     --------MLEVRSMDMTPKS--PEPESETPTRIQP---------AKPISFSNGIIKRHH
gm025827_Glyma0 ---------MKQKHRPGSPPPSLPQRQKPHLSRMVSSNAPTTTTTSTTLSL---------
gm050382_Glyma1 MDITPTTTIINTTTTPSAAKS--PEHETETPTRITT---PITPTTTKTLSFSNGVLKRHH
                         ::      :. .  *: :.   :*: .         :..:*:         

AT3G28920.1     HHH--HNNNK-VTYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRN
gm025827_Glyma0 -----RWLPT----KNASKITPPHLGGHALDGCGEFMPSPTATAADPSSIKCAACGCHRN
gm050382_Glyma1 HHHLHHPMPAVVTYKECLKNHAANLGGLALDGCGEFMPSPTATAADPSSIKCAACGCHRN
                     :        *:. *  .. :** ************::*.:**:*:**********

AT3G28920.1     FHRRETDDSSAVPPPSLLPSSTTTAAIEYQPHHRHHPPPPL--APPLPRSPNSSSPPPIS
gm025827_Glyma0 FHRREPEE-----PPI---ASTTTHVIEYQPHHRHHPPPPLHAAAVATRSPNSASPPPIS
gm050382_Glyma1 FHRREPED-----PPI---TSNTTHVIEYQPHHRHHPPPPLHAAA-AARSPNSASPPPIS
                *****.::     **    :*.** .***************  *.  .*****:******

AT3G28920.1     SSY------MLLALSGNNKTAPFSDLNFAAAANHLSATPGSRKRFRTKFSSNQKEKMHEF
gm025827_Glyma0 SSYYPSAPHMLLALSAGLAAPPESTAAPAAAP--------TRKRFRTKFSQEQKEKMHKF
gm050382_Glyma1 SSYYPSAPHMLLALSAGLAAPPESTAAPSAAL--------SRKRFRTKFSQEQKEKMHKF
                ***      ******..  :.* *    :**         :*********.:******:*

AT3G28920.1     ADRIGWKIQKRDEDEVRDFCREIGVDKGVLKVWMHNNKNSFKFSGGGATTVQRNDNG---
gm025827_Glyma0 AEKVGWKIQKRDEDLIHEICNEVGVDRSVLKVWMHNNKNTFA----------KKDNNNIV
gm050382_Glyma1 AEKVGWKIQKRDEDLIHEFCNEVGVDRSVLKVWMHNNKNTFA----------KKDNN---
                *:::********** ::::*.*:***:.***********:*           ::**.   

AT3G28920.1     ------------------------IGGENSNDDGVRGLANDGDGGGGRFESDSGGADGGG
gm025827_Glyma0 TSNDINITTKNNISTDNDANGSDVKVFENPNND----------GGEDRAEDPSSNHYDGV
gm050382_Glyma1 ------------------------IVFENPNNNHGSG----SGGGEDPAEDPSRNHYGGV
                                           **.*::          ** .  *. * .  .* 

AT3G28920.1     N-VNASSSSS--
gm025827_Glyma0 NVVGANGSSSS-
gm050382_Glyma1 N-VGANGSSSSS
                * *.*..***
BoxShade v3.31 C (beta, 970507) Output
AT3G28920.1     - - - - - - - - M L E V R S M D M T P K S - - P E P E S E T P T R I Q P - - - - - - - - - A K P I S F S N G I I K R H H
gm025827_Glyma0    - - - - - - - - - M K Q K H R P G S P P P S L P Q R Q K P H L S R M V S S N A P T T T T T S T T L S L - - - - - - - - -
gm050382_Glyma1    M D I T P T T T I I N T T T T P S A A K S - - P E H E T E T P T R I T T - - - P I T P T T T K T L S F S N G V L K R H H
 
AT3G28920.1     H H H - - H N N N K - V T Y K E C L K N H A A A I G G H A L D G C G E F M P S P S S T P S D P T S L K C A A C G C H R N
gm025827_Glyma0    - - - - - R W L P T - - - - K N A S K I T P P H L G G H A L D G C G E F M P S P T A T A A D P S S I K C A A C G C H R N
gm050382_Glyma1    H H H L H H P M P A V V T Y K E C L K N H A A N L G G L A L D G C G E F M P S P T A T A A D P S S I K C A A C G C H R N
 
AT3G28920.1     F H R R E T D D S S A V P P P S L L P S S T T T A A I E Y Q P H H R H H P P P P L - - A P P L P R S P N S S S P P P I S
gm025827_Glyma0    F H R R E P E E - - - - - P P I - - - A S T T T H V I E Y Q P H H R H H P P P P L H A A A V A T R S P N S A S P P P I S
gm050382_Glyma1    F H R R E P E D - - - - - P P I - - - T S N T T H V I E Y Q P H H R H H P P P P L H A A A - A A R S P N S A S P P P I S
 
AT3G28920.1     S S Y - - - - - - M L L A L S G N N K T A P F S D L N F A A A A N H L S A T P G S R K R F R T K F S S N Q K E K M H E F
gm025827_Glyma0    S S Y Y P S A P H M L L A L S A G L A A P P E S T A A P A A A P - - - - - - - - T R K R F R T K F S Q E Q K E K M H K F
gm050382_Glyma1    S S Y Y P S A P H M L L A L S A G L A A P P E S T A A P S A A L - - - - - - - - S R K R F R T K F S Q E Q K E K M H K F
 
AT3G28920.1     A D R I G W K I Q K R D E D E V R D F C R E I G V D K G V L K V W M H N N K N S F K F S G G G A T T V Q R N D N G - - -
gm025827_Glyma0    A E K V G W K I Q K R D E D L I H E I C N E V G V D R S V L K V W M H N N K N T F A - - - - - - - - - - K K D N N N I V
gm050382_Glyma1    A E K V G W K I Q K R D E D L I H E F C N E V G V D R S V L K V W M H N N K N T F A - - - - - - - - - - K K D N N - - -
 
AT3G28920.1     - - - - - - - - - - - - - - - - - - - - - - - - I G G E N S N D D G V R G L A N D G D G G G G R F E S D S G G A D G G G
gm025827_Glyma0    T S N D I N I T T K N N I S T D N D A N G S D V K V F E N P N N D - - - - - - - - - - G G E D R A E D P S S N H Y D G V
gm050382_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - I V F E N P N N N H G S G - - - - S G G G E D P A E D P S R N H Y G G V
 
AT3G28920.1     N - V N A S S S S S - -
gm025827_Glyma0    N V V G A N G S S S S -
gm050382_Glyma1    N - V G A N G S S S S S
 
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