fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G28920.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035046 not found in 331aa AT3G28920.1 1st_1st 0.517241379 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G28920.1     MLEV-----RSMDMTPKSPEPESETPTRIQP-----AKPISFSNGIIKRHHHHHHNNNKV
gm035046_Glyma1 -MEIITPTATATNATAKSPEPDIETMTRIHQNPNPNPKPVSFSNGVLKRHHVNHR--AAV
                 :*:      : : *.*****: ** ***:      .**:*****::**** :*:    *

AT3G28920.1     TYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDDSSAV
gm035046_Glyma1 VYKECLKNHVASLGGHALDGCGEFMPSPAATADDPSSIKCAACGCHRNFHRREPEESPIS
                .********.*::***************::*..**:*:***************.::*.  

AT3G28920.1     PPPSLLPSSTTTAAIEYQPHHRHHPPPPLAPPLPRSPNSSSPPPISS----SYMLLALSG
gm035046_Glyma1 P--------ATHHVLEYRPHHRHHPPPP-----HRSPNSASPPPISSYPSAPHMLLALSG
                *        :*  .:**:**********      *****:*******    .:*******

AT3G28920.1     --------NNKTAPFSDLNFAAAANHLSATPGSRKRFRTKFSSNQKEKMHEFADRIGWKI
gm035046_Glyma1 GAGLSVAPENTAAP-------APPHH------SRKRFRTKFTQEQKEKMHEFADKVGWKM
                        :*.:**       *..:*      *********:.:**********::***:

AT3G28920.1     QKRDEDEVRDFCREIGVDKGVLKVWMHNNKNSF----KFSGG------------------
gm035046_Glyma1 QRRDEEMVMEFCNEIGVDRGVLKVWMHNNKNTFAKKDNLNGNSIGNVAIVSANGVAPIGA
                *:***: * :**.*****:************:*    ::.*.                  

AT3G28920.1     -GATTVQR------------NDNGIGGENSNDDGVRGLANDGDGGGGRFESDSGGADGGG
gm035046_Glyma1 VGSATVRSSVHVHEHEHGGINGNGSGDNNHNPLGSRDV--------NEYENDS-GTNGGG
                 *::**:             *.** *.:* *  * *.:        ..:*.** *::***

AT3G28920.1     NVNASSSSS
gm035046_Glyma1 GTNGSSSSS
                ..*.*****
BoxShade v3.31 C (beta, 970507) Output
AT3G28920.1     M L E V - - - - - R S M D M T P K S P E P E S E T P T R I Q P - - - - - A K P I S F S N G I I K R H H H H H H N N N K V
gm035046_Glyma1    - M E I I T P T A T A T N A T A K S P E P D I E T M T R I H Q N P N P N P K P V S F S N G V L K R H H V N H R - - A A V
 
AT3G28920.1     T Y K E C L K N H A A A I G G H A L D G C G E F M P S P S S T P S D P T S L K C A A C G C H R N F H R R E T D D S S A V
gm035046_Glyma1    V Y K E C L K N H V A S L G G H A L D G C G E F M P S P A A T A D D P S S I K C A A C G C H R N F H R R E P E E S P I S
 
AT3G28920.1     P P P S L L P S S T T T A A I E Y Q P H H R H H P P P P L A P P L P R S P N S S S P P P I S S - - - - S Y M L L A L S G
gm035046_Glyma1    P - - - - - - - - A T H H V L E Y R P H H R H H P P P P - - - - - H R S P N S A S P P P I S S Y P S A P H M L L A L S G
 
AT3G28920.1     - - - - - - - - N N K T A P F S D L N F A A A A N H L S A T P G S R K R F R T K F S S N Q K E K M H E F A D R I G W K I
gm035046_Glyma1    G A G L S V A P E N T A A P - - - - - - - A P P H H - - - - - - S R K R F R T K F T Q E Q K E K M H E F A D K V G W K M
 
AT3G28920.1     Q K R D E D E V R D F C R E I G V D K G V L K V W M H N N K N S F - - - - K F S G G - - - - - - - - - - - - - - - - - -
gm035046_Glyma1    Q R R D E E M V M E F C N E I G V D R G V L K V W M H N N K N T F A K K D N L N G N S I G N V A I V S A N G V A P I G A
 
AT3G28920.1     - G A T T V Q R - - - - - - - - - - - - N D N G I G G E N S N D D G V R G L A N D G D G G G G R F E S D S G G A D G G G
gm035046_Glyma1    V G S A T V R S S V H V H E H E H G G I N G N G S G D N N H N P L G S R D V - - - - - - - - N E Y E N D S - G T N G G G
 
AT3G28920.1     N V N A S S S S S
gm035046_Glyma1    G T N G S S S S S
 
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