fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G28920.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035046 not found in 331aa AT3G28920.1 1st_1st 0.517241379 Ia
Gm050382 not found in 308aa AT3G28920.1 not_1st 0.511936339 II
Gm025827 not found in 308aa AT3G28920.1 not_1st 0.416445623 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G28920.1     ---------MLEVRSMDMTPKS--PEPESETPTRIQ----P-----AKPISFSNGIIKRH
gm025827_Glyma0 ----------MKQKHRPGSPPPSLPQRQKPHLSRMVSSNAPTTTTTSTTLSL--------
gm050382_Glyma1 MD-ITPTTTIINTTTTPSAAKS--PEHETETPTRITT---PITPTTTKTLSFSNGVLKRH
gm035046_Glyma1 MEIITPT-----ATATNATAKS--PEPDIETMTRIHQNPNP----NPKPVSFSNGVLKRH
                                  :. .  *: :    :*:     *     ...:*:        

AT3G28920.1     HHHHHNN---NKVTYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHR
gm025827_Glyma0 ------RWLPT----KNASKITPPHLGGHALDGCGEFMPSPTATAADPSSIKCAACGCHR
gm050382_Glyma1 HHHHLHHPMPAVVTYKECLKNHAANLGGLALDGCGEFMPSPTATAADPSSIKCAACGCHR
gm035046_Glyma1 HVNHR-----AAVVYKECLKNHVASLGGHALDGCGEFMPSPAATADDPSSIKCAACGCHR
                               *:. *   . :** ************::*. **:*:*********

AT3G28920.1     NFHRRETDDSSAVPPPSLLPSSTTTAAIEYQPHHRHHPPPPLAPPL--PRSPNSSSPPPI
gm025827_Glyma0 NFHRREPEE-----PPI---ASTTTHVIEYQPHHRHHPPPPLHAAAVATRSPNSASPPPI
gm050382_Glyma1 NFHRREPED-----PPI---TSNTTHVIEYQPHHRHHPPPPLHAAA-AARSPNSASPPPI
gm035046_Glyma1 NFHRREPEE-----SPI---SPATHHVLEYRPHHRHHPPPP-------HRSPNSASPPPI
                ******.::     .*    :. *  .:**:**********        *****:*****

AT3G28920.1     SSSY------MLLALSGNNKTAPFSDLNFAAAANHLSATP-GSRKRFRTKFSSNQKEKMH
gm025827_Glyma0 SSSYYPSAPHMLLALS--------AGLAAPPESTAAPAAA-PTRKRFRTKFSQEQKEKMH
gm050382_Glyma1 SSSYYPSAPHMLLALS--------AGLAAPPESTAAPSAA-LSRKRFRTKFSQEQKEKMH
gm035046_Glyma1 SS--YPSAPHMLLALSG------GAGLSVAPENTAAPAPPHHSRKRFRTKFTQEQKEKMH
                **        ******        :.*  ..  .  .:..  :********:.:******

AT3G28920.1     EFADRIGWKIQKRDEDEVRDFCREIGVDKGVLKVWMHNNKNSFK-------FSGGGATTV
gm025827_Glyma0 KFAEKVGWKIQKRDEDLIHEICNEVGVDRSVLKVWMHNNKNTFAKKDNNNIVTSNDINIT
gm050382_Glyma1 KFAEKVGWKIQKRDEDLIHEFCNEVGVDRSVLKVWMHNNKNTFAKKDNN-----------
gm035046_Glyma1 EFADKVGWKMQRRDEEMVMEFCNEIGVDRGVLKVWMHNNKNTFAKKDNLNGNSIGNVAIV
                :**:::***:*:***: : ::*.*:***:.***********:*                 

AT3G28920.1     QRN----DNGIGG----------ENS----NDD-GVRGLANDGDGGGGRFESDS------
gm025827_Glyma0 TKNNISTDNDANG----SDVKVFENP----NND------------GGEDRAEDP----SS
gm050382_Glyma1 --------------------IVFENP----NNNHG------SGSGGGEDPAEDP----SR
gm035046_Glyma1 SANGVAPIGAVGSATVRSSVHVHEHEHGGINGN------------GSGDNNHNPLGSRDV
                                       *:     *.:            *.     :.      

AT3G28920.1     ------GGADGGGNVNASSSSS
gm025827_Glyma0 NHY---DGVN-VVGANGSSSS-
gm050382_Glyma1 NHY---GGVN--VGANGSSSSS
gm035046_Glyma1 NEYENDSGTNGGGGTNGSSSSS
                      .*.:   ..*.****
BoxShade v3.31 C (beta, 970507) Output
AT3G28920.1     - - - - - - - - - M L E V R S M D M T P K S - - P E P E S E T P T R I Q - - - - P - - - - - A K P I S F S N G I I K R H
gm025827_Glyma0    - - - - - - - - - - M K Q K H R P G S P P P S L P Q R Q K P H L S R M V S S N A P T T T T T S T T L S L - - - - - - - -
gm050382_Glyma1    M D - I T P T T T I I N T T T T P S A A K S - - P E H E T E T P T R I T T - - - P I T P T T T K T L S F S N G V L K R H
gm035046_Glyma1    M E I I T P T - - - - - A T A T N A T A K S - - P E P D I E T M T R I H Q N P N P - - - - N P K P V S F S N G V L K R H
 
AT3G28920.1     H H H H H N N - - - N K V T Y K E C L K N H A A A I G G H A L D G C G E F M P S P S S T P S D P T S L K C A A C G C H R
gm025827_Glyma0    - - - - - - R W L P T - - - - K N A S K I T P P H L G G H A L D G C G E F M P S P T A T A A D P S S I K C A A C G C H R
gm050382_Glyma1    H H H H L H H P M P A V V T Y K E C L K N H A A N L G G L A L D G C G E F M P S P T A T A A D P S S I K C A A C G C H R
gm035046_Glyma1    H V N H R - - - - - A A V V Y K E C L K N H V A S L G G H A L D G C G E F M P S P A A T A D D P S S I K C A A C G C H R
 
AT3G28920.1     N F H R R E T D D S S A V P P P S L L P S S T T T A A I E Y Q P H H R H H P P P P L A P P L - - P R S P N S S S P P P I
gm025827_Glyma0    N F H R R E P E E - - - - - P P I - - - A S T T T H V I E Y Q P H H R H H P P P P L H A A A V A T R S P N S A S P P P I
gm050382_Glyma1    N F H R R E P E D - - - - - P P I - - - T S N T T H V I E Y Q P H H R H H P P P P L H A A A - A A R S P N S A S P P P I
gm035046_Glyma1    N F H R R E P E E - - - - - S P I - - - S P A T H H V L E Y R P H H R H H P P P P - - - - - - - H R S P N S A S P P P I
 
AT3G28920.1     S S S Y - - - - - - M L L A L S G N N K T A P F S D L N F A A A A N H L S A T P - G S R K R F R T K F S S N Q K E K M H
gm025827_Glyma0    S S S Y Y P S A P H M L L A L S - - - - - - - - A G L A A P P E S T A A P A A A - P T R K R F R T K F S Q E Q K E K M H
gm050382_Glyma1    S S S Y Y P S A P H M L L A L S - - - - - - - - A G L A A P P E S T A A P S A A - L S R K R F R T K F S Q E Q K E K M H
gm035046_Glyma1    S S - - Y P S A P H M L L A L S G - - - - - - G A G L S V A P E N T A A P A P P H H S R K R F R T K F T Q E Q K E K M H
 
AT3G28920.1     E F A D R I G W K I Q K R D E D E V R D F C R E I G V D K G V L K V W M H N N K N S F K - - - - - - - F S G G G A T T V
gm025827_Glyma0    K F A E K V G W K I Q K R D E D L I H E I C N E V G V D R S V L K V W M H N N K N T F A K K D N N N I V T S N D I N I T
gm050382_Glyma1    K F A E K V G W K I Q K R D E D L I H E F C N E V G V D R S V L K V W M H N N K N T F A K K D N N - - - - - - - - - - -
gm035046_Glyma1    E F A D K V G W K M Q R R D E E M V M E F C N E I G V D R G V L K V W M H N N K N T F A K K D N L N G N S I G N V A I V
 
AT3G28920.1     Q R N - - - - D N G I G G - - - - - - - - - - E N S - - - - N D D - G V R G L A N D G D G G G G R F E S D S - - - - - -
gm025827_Glyma0    T K N N I S T D N D A N G - - - - S D V K V F E N P - - - - N N D - - - - - - - - - - - - G G E D R A E D P - - - - S S
gm050382_Glyma1    - - - - - - - - - - - - - - - - - - - - I V F E N P - - - - N N N H G - - - - - - S G S G G G E D P A E D P - - - - S R
gm035046_Glyma1    S A N G V A P I G A V G S A T V R S S V H V H E H E H G G I N G N - - - - - - - - - - - - G S G D N N H N P L G S R D V
 
AT3G28920.1     - - - - - - G G A D G G G N V N A S S S S S
gm025827_Glyma0    N H Y - - - D G V N - V V G A N G S S S S -
gm050382_Glyma1    N H Y - - - G G V N - - V G A N G S S S S S
gm035046_Glyma1    N E Y E N D S G T N G G G G T N G S S S S S
 
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