fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G29035.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm046633 not found in 350aa AT5G61430.1 1st_not 0.474878444 II
Pt026888 not found in 359aa AT5G61430.1 1st_not 0.481361426 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G29035.1     MDYKVSRSGEIVEGEVED-SEKIDLPPGFRFHPTDEELITHYLRPKVVNSFFSAIAIGEV
pt026888_POPTR_ --------MENISGLGKEGDDQMDLPPGFRFHPTDEELISHYLYKKVLDITFSAKAIGDV
gm046633_Glyma1 --------MENVPVVCKE-DDQMDLPPGFRFHPTDEELISHYLYKKVIDTKFCARAIGEV
                         * :    :: .:::****************:***  **::  *.* ***:*

AT3G29035.1     DLNKVEPWDLPWKAKLGEKEWYFFCVRDRKYPTGLRTNRATKAGYWKATGKDKEIFKGKS
pt026888_POPTR_ DLNKSEPWELPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKF
gm046633_Glyma1 DLNKSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFRGKS
                **** ***:******:*************************:*************::** 

AT3G29035.1     LVGMKKTLVFYKGRAPKGVKTNWVMHEYRLEGKFAIDNLSKTAKNECVISRVFHTRTDGT
pt026888_POPTR_ LVGMKKTLVFYKGRAPKGGKTNWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFQKSSAGK
gm046633_Glyma1 LVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFQKSSAGK
                ***********:****** *:*************::.**.****** **.***:. : *.

AT3G29035.1     KEHMS--------------VGLPPLMDSSPYLKSRGQDSLAGTTLGGLLSHVTYFS---D
pt026888_POPTR_ KTHISGLVRLGSFSNEFSPSGLPPLMDSSPYNCK--IKPVAES------AYVPCFSNPIN
gm046633_Glyma1 KTHISGIMRLDSFADELGSSALPPLSDSSPSIGN--TKPLNDT------AYVPCFSNPID
                * *:*               .**** ****   .   ..:  :      ::*. **   :

AT3G29035.1     QTTDDKSLVADFKTTM--FGSGSTNFLPNI---------------------GSLLDFDPL
pt026888_POPTR_ VQRNQQDTIDSFDNHLLAFSTNPLEVFPRIPLLNPFYTPQAVPVSGNLQYPGSVL-----
gm046633_Glyma1 VQRNQEGVFDSFTNSIYAVSSNPMGILPRMPPSGSFYSTQGVQAAPNLAFPGSVYT----
                   :::. . .* . :  ..:..  .:*.:                     **:      

AT3G29035.1     FLQNNSSVLKMLLDN--------------------EETQFKKNLHNS---GSSESELTAS
pt026888_POPTR_ -MQDH-SILRALIANQGTNMKQQSFKIERDMVGVSQDS--TTDMNTEIYSVISNLEVGKR
gm046633_Glyma1 -LQDH-TILRTLCENNG-------YKPERDMISVSQETGLTTDINAE---TSSNFDMGRR
                 :*:: ::*: *  *                    :::  ..::: .     *: ::   

AT3G29035.1     SWQGHNSYGST--GPVNLDCVWKF
pt026888_POPTR_ SGDDQDATPSTLVASTDLDSFWNY
gm046633_Glyma1 PFENHNHA-SVSVAPLDLDGLWNY
                . :.::   *.  .. :** .*::
BoxShade v3.31 C (beta, 970507) Output
AT3G29035.1     M D Y K V S R S G E I V E G E V E D - S E K I D L P P G F R F H P T D E E L I T H Y L R P K V V N S F F S A I A I G E V
pt026888_POPTR_    - - - - - - - - M E N I S G L G K E G D D Q M D L P P G F R F H P T D E E L I S H Y L Y K K V L D I T F S A K A I G D V
gm046633_Glyma1    - - - - - - - - M E N V P V V C K E - D D Q M D L P P G F R F H P T D E E L I S H Y L Y K K V I D T K F C A R A I G E V
 
AT3G29035.1     D L N K V E P W D L P W K A K L G E K E W Y F F C V R D R K Y P T G L R T N R A T K A G Y W K A T G K D K E I F K G K S
pt026888_POPTR_    D L N K S E P W E L P W K A K M G E K E W Y F F C V R D R K Y P T G L R T N R A T E A G Y W K A T G K D K E I Y R G K F
gm046633_Glyma1    D L N K S E P W D L P W K A K M G E K E W Y F F C V R D R K Y P T G L R T N R A T E A G Y W K A T G K D K E I F R G K S
 
AT3G29035.1     L V G M K K T L V F Y K G R A P K G V K T N W V M H E Y R L E G K F A I D N L S K T A K N E C V I S R V F H T R T D G T
pt026888_POPTR_    L V G M K K T L V F Y K G R A P K G G K T N W V M H E Y R L E G K F S V H N L P K T A K N E W V I C R V F Q K S S A G K
gm046633_Glyma1    L V G M K K T L V F Y R G R A P K G E K S N W V M H E Y R L E G K F S V H N L P K T A K N E W V I C R V F Q K S S A G K
 
AT3G29035.1     K E H M S - - - - - - - - - - - - - - V G L P P L M D S S P Y L K S R G Q D S L A G T T L G G L L S H V T Y F S - - - D
pt026888_POPTR_    K T H I S G L V R L G S F S N E F S P S G L P P L M D S S P Y N C K - - I K P V A E S - - - - - - A Y V P C F S N P I N
gm046633_Glyma1    K T H I S G I M R L D S F A D E L G S S A L P P L S D S S P S I G N - - T K P L N D T - - - - - - A Y V P C F S N P I D
 
AT3G29035.1     Q T T D D K S L V A D F K T T M - - F G S G S T N F L P N I - - - - - - - - - - - - - - - - - - - - - G S L L D F D P L
pt026888_POPTR_    V Q R N Q Q D T I D S F D N H L L A F S T N P L E V F P R I P L L N P F Y T P Q A V P V S G N L Q Y P G S V L - - - - -
gm046633_Glyma1    V Q R N Q E G V F D S F T N S I Y A V S S N P M G I L P R M P P S G S F Y S T Q G V Q A A P N L A F P G S V Y T - - - -
 
AT3G29035.1     F L Q N N S S V L K M L L D N - - - - - - - - - - - - - - - - - - - - E E T Q F K K N L H N S - - - G S S E S E L T A S
pt026888_POPTR_    - M Q D H - S I L R A L I A N Q G T N M K Q Q S F K I E R D M V G V S Q D S - - T T D M N T E I Y S V I S N L E V G K R
gm046633_Glyma1    - L Q D H - T I L R T L C E N N G - - - - - - - Y K P E R D M I S V S Q E T G L T T D I N A E - - - T S S N F D M G R R
 
AT3G29035.1     S W Q G H N S Y G S T - - G P V N L D C V W K F
pt026888_POPTR_    S G D D Q D A T P S T L V A S T D L D S F W N Y
gm046633_Glyma1    P F E N H N H A - S V S V A P L D L D G L W N Y
 
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