fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G29035.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026888 not found in 359aa AT5G61430.1 1st_not 0.481361426 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G29035.1     MDYKVSRSGEIVEGEVEDSEKIDLPPGFRFHPTDEELITHYLRPKVVNSFFSAIAIGEVD
pt026888_POPTR_ ME-NISGLGK------EGDDQMDLPPGFRFHPTDEELISHYLYKKVLDITFSAKAIGDVD
                *: ::*  *:      *..:::****************:***  **::  *** ***:**

AT3G29035.1     LNKVEPWDLPWKAKLGEKEWYFFCVRDRKYPTGLRTNRATKAGYWKATGKDKEIFKGKSL
pt026888_POPTR_ LNKSEPWELPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKFL
                *** ***:******:*************************:*************::** *

AT3G29035.1     VGMKKTLVFYKGRAPKGVKTNWVMHEYRLEGKFAIDNLSKTAKNECVISRVFHTRTDGTK
pt026888_POPTR_ VGMKKTLVFYKGRAPKGGKTNWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFQKSSAGKK
                ***************** ***************::.**.****** **.***:. : *.*

AT3G29035.1     EHMS--------------VGLPPLMDSSPY---LKSRGQDSLAGTTLGGLLSHVTYFSD-
pt026888_POPTR_ THISGLVRLGSFSNEFSPSGLPPLMDSSPYNCKIKPVAES-----------AYVPCFSNP
                 *:*               ***********   :*. .:.           ::*. **: 

AT3G29035.1     --------QTTD--DKSLVADFKTTMFGSGSTNFLPNIGSLLDFDPLF------------
pt026888_POPTR_ INVQRNQQDTIDSFDNHLLA------FSTNPLEVFPRIPLL---NPFYTPQAVPVSGNLQ
                        :* *  *: *:*      *.:.. :.:*.*  *   :*::            

AT3G29035.1     -----LQNNSSVLKMLLDNEETQFKKNLHN---------------------SGSSESELT
pt026888_POPTR_ YPGSVLMQDHSILRALIANQGTNMKQQSFKIERDMVGVSQDSTTDMNTEIYSVISNLEVG
                     * :: *:*: *: *: *::*:: .:                     *  *: *: 

AT3G29035.1     ASSWQGHNSYGST--GPVNLDCVWKF
pt026888_POPTR_ KRSGDDQDATPSTLVASTDLDSFWNY
                  * :.:::  **  ...:**..*::
BoxShade v3.31 C (beta, 970507) Output
AT3G29035.1     M D Y K V S R S G E I V E G E V E D S E K I D L P P G F R F H P T D E E L I T H Y L R P K V V N S F F S A I A I G E V D
pt026888_POPTR_    M E - N I S G L G K - - - - - - E G D D Q M D L P P G F R F H P T D E E L I S H Y L Y K K V L D I T F S A K A I G D V D
 
AT3G29035.1     L N K V E P W D L P W K A K L G E K E W Y F F C V R D R K Y P T G L R T N R A T K A G Y W K A T G K D K E I F K G K S L
pt026888_POPTR_    L N K S E P W E L P W K A K M G E K E W Y F F C V R D R K Y P T G L R T N R A T E A G Y W K A T G K D K E I Y R G K F L
 
AT3G29035.1     V G M K K T L V F Y K G R A P K G V K T N W V M H E Y R L E G K F A I D N L S K T A K N E C V I S R V F H T R T D G T K
pt026888_POPTR_    V G M K K T L V F Y K G R A P K G G K T N W V M H E Y R L E G K F S V H N L P K T A K N E W V I C R V F Q K S S A G K K
 
AT3G29035.1     E H M S - - - - - - - - - - - - - - V G L P P L M D S S P Y - - - L K S R G Q D S L A G T T L G G L L S H V T Y F S D -
pt026888_POPTR_    T H I S G L V R L G S F S N E F S P S G L P P L M D S S P Y N C K I K P V A E S - - - - - - - - - - - A Y V P C F S N P
 
AT3G29035.1     - - - - - - - - Q T T D - - D K S L V A D F K T T M F G S G S T N F L P N I G S L L D F D P L F - - - - - - - - - - - -
pt026888_POPTR_    I N V Q R N Q Q D T I D S F D N H L L A - - - - - - F S T N P L E V F P R I P L L - - - N P F Y T P Q A V P V S G N L Q
 
AT3G29035.1     - - - - - L Q N N S S V L K M L L D N E E T Q F K K N L H N - - - - - - - - - - - - - - - - - - - - - S G S S E S E L T
pt026888_POPTR_    Y P G S V L M Q D H S I L R A L I A N Q G T N M K Q Q S F K I E R D M V G V S Q D S T T D M N T E I Y S V I S N L E V G
 
AT3G29035.1     A S S W Q G H N S Y G S T - - G P V N L D C V W K F
pt026888_POPTR_    K R S G D D Q D A T P S T L V A S T D L D S F W N Y
 
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