fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G29035.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm046633 not found in 350aa AT5G61430.1 1st_not 0.474878444 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G29035.1     MDYKVSRSGEIVEGEVEDSEKIDLPPGFRFHPTDEELITHYLRPKVVNSFFSAIAIGEVD
gm046633_Glyma1 --------MENVPVVCKEDDQMDLPPGFRFHPTDEELISHYLYKKVIDTKFCARAIGEVD
                         * *    ::.:::****************:***  **::: *.* ******

AT3G29035.1     LNKVEPWDLPWKAKLGEKEWYFFCVRDRKYPTGLRTNRATKAGYWKATGKDKEIFKGKSL
gm046633_Glyma1 LNKSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFRGKSL
                *** **********:*************************:**************:****

AT3G29035.1     VGMKKTLVFYKGRAPKGVKTNWVMHEYRLEGKFAIDNLSKTAKNECVISRVFHTRTDGTK
gm046633_Glyma1 VGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFQKSSAGKK
                **********:****** *:*************::.**.****** **.***:. : *.*

AT3G29035.1     EHM--------------SVGLPPLMDSSPYLKSRGQDSLAGTTLGGLLSHVTYFS---DQ
gm046633_Glyma1 THISGIMRLDSFADELGSSALPPLSDSSP--------SIGNTKPLNDTAYVPCFSNPIDV
                 *:              * .**** ****        *:..*.  .  ::*. **   * 

AT3G29035.1     TTDDKSLVADFKTTMFGSGSTNF-----LPNIGSL-----------LDF-DPLFLQNNSS
gm046633_Glyma1 QRNQEGVFDSFTNSIYAVSSNPMGILPRMPPSGSFYSTQGVQAAPNLAFPGSVYTLQDHT
                  :::.:. .*..:::. .*. :     :*  **:           * * ..::  :: :

AT3G29035.1     VLKMLLDN-------------EETQFKKNLHNSGSSESELTASSWQGHNSYG-STGPVNL
gm046633_Glyma1 ILRTLCENNGYKPERDMISVSQETGLTTDINAETSSNFDMGRRPFENHNHASVSVAPLDL
                :*: * :*             :** :..::: . **: ::   .::.**  . *..*::*

AT3G29035.1     DCVWKF
gm046633_Glyma1 DGLWNY
                * :*::
BoxShade v3.31 C (beta, 970507) Output
AT3G29035.1     M D Y K V S R S G E I V E G E V E D S E K I D L P P G F R F H P T D E E L I T H Y L R P K V V N S F F S A I A I G E V D
gm046633_Glyma1    - - - - - - - - M E N V P V V C K E D D Q M D L P P G F R F H P T D E E L I S H Y L Y K K V I D T K F C A R A I G E V D
 
AT3G29035.1     L N K V E P W D L P W K A K L G E K E W Y F F C V R D R K Y P T G L R T N R A T K A G Y W K A T G K D K E I F K G K S L
gm046633_Glyma1    L N K S E P W D L P W K A K M G E K E W Y F F C V R D R K Y P T G L R T N R A T E A G Y W K A T G K D K E I F R G K S L
 
AT3G29035.1     V G M K K T L V F Y K G R A P K G V K T N W V M H E Y R L E G K F A I D N L S K T A K N E C V I S R V F H T R T D G T K
gm046633_Glyma1    V G M K K T L V F Y R G R A P K G E K S N W V M H E Y R L E G K F S V H N L P K T A K N E W V I C R V F Q K S S A G K K
 
AT3G29035.1     E H M - - - - - - - - - - - - - - S V G L P P L M D S S P Y L K S R G Q D S L A G T T L G G L L S H V T Y F S - - - D Q
gm046633_Glyma1    T H I S G I M R L D S F A D E L G S S A L P P L S D S S P - - - - - - - - S I G N T K P L N D T A Y V P C F S N P I D V
 
AT3G29035.1     T T D D K S L V A D F K T T M F G S G S T N F - - - - - L P N I G S L - - - - - - - - - - - L D F - D P L F L Q N N S S
gm046633_Glyma1    Q R N Q E G V F D S F T N S I Y A V S S N P M G I L P R M P P S G S F Y S T Q G V Q A A P N L A F P G S V Y T L Q D H T
 
AT3G29035.1     V L K M L L D N - - - - - - - - - - - - - E E T Q F K K N L H N S G S S E S E L T A S S W Q G H N S Y G - S T G P V N L
gm046633_Glyma1    I L R T L C E N N G Y K P E R D M I S V S Q E T G L T T D I N A E T S S N F D M G R R P F E N H N H A S V S V A P L D L
 
AT3G29035.1     D C V W K F
gm046633_Glyma1    D G L W N Y
 
0