fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G30210.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt003856 not found in 218aa AT3G30210.1 not_1st 0.428853754 II
Pt020408 not found in 209aa AT3G30210.1 not_1st 0.424901185 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G30210.1     ---MLDWGVQGHHQKHDHDIYQQQHQQQGCRKGPWTLEEDKLLAEYVTSHGEGRWSTVAK
pt003856_POPTR_ MVARMGWGI----------------PEKGWRKGPWTPEEDKLLIEYVSLHGEGRWSSVSR
pt020408_POPTR_ ----MGRGI----------------AEQGWRKGPWTPEEDKLLSEYVSSNGEGRWSSVSR
                    :. *:                 ::* ****** ****** ***: :******:*::

AT3G30210.1     CAGLNRSGKSCRLRWVNYLRPGLKRGQITPQEEGIILELHSLWGNKWSTIARYLPGRTDN
pt003856_POPTR_ CPGLNRSGKSCRLRWVNYLRPGLKRGQITPQEEGIIIELHALLGNKWSTIARYLPGRTDN
pt020408_POPTR_ CSVLNFGGKSCRLRWVNYLRPGLKRGQITPQEEGIIIELHALWGNKWSTIARYLPGRTDN
                *. ** .*****************************:***:* *****************

AT3G30210.1     EIKNYWRTHYKKNQKSSSKQDKVKKSLSRKQQQVDLKPQPQAQSENHQSQLVSQDHMNID
pt003856_POPTR_ EIKNYWRTHSKKKEKSSQKQLEKRKAQILKQEEEHQQ-HLQQQQQQQQQQLEAGD-MNMV
pt020408_POPTR_ EIKNYWRTHFKKKDKSSQKQ-EKRKALILEQEVQH--------HQQQQQQLEAGE-MKMV
                ********* **::***.** : :*:   :*:  .         :::*.** : : *:: 

AT3G30210.1     N--DH---NIASSLYYPTSVFDDKL--YMPQSVATTSSDHSMIDEGHLWGSLWNLDEDDP
pt003856_POPTR_ NTIAHEKMHGAPEM--MYPTVEDQCLPVMSQDVVSW-ADSVVEDYYRLWGGFWNLD-DHP
pt020408_POPTR_ NTIDHVKMHEAQEMYFMYHNLEDQCSPVMTQDVASW-ADFVVEDYYGLWGGLWNLD-DHP
                *   *   : * .:      .:*:    *.*.*.:  :*  : *   ***.:**** *.*

AT3G30210.1     HSFGGGSGQGTAADIDEKFPDSGIEAPSCGSGDYSYTGVYMGGYIF
pt003856_POPTR_ ----------------------------------------------
pt020408_POPTR_ Q---------------------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT3G30210.1     - - - M L D W G V Q G H H Q K H D H D I Y Q Q Q H Q Q Q G C R K G P W T L E E D K L L A E Y V T S H G E G R W S T V A K
pt003856_POPTR_    M V A R M G W G I - - - - - - - - - - - - - - - - P E K G W R K G P W T P E E D K L L I E Y V S L H G E G R W S S V S R
pt020408_POPTR_    - - - - M G R G I - - - - - - - - - - - - - - - - A E Q G W R K G P W T P E E D K L L S E Y V S S N G E G R W S S V S R
 
AT3G30210.1     C A G L N R S G K S C R L R W V N Y L R P G L K R G Q I T P Q E E G I I L E L H S L W G N K W S T I A R Y L P G R T D N
pt003856_POPTR_    C P G L N R S G K S C R L R W V N Y L R P G L K R G Q I T P Q E E G I I I E L H A L L G N K W S T I A R Y L P G R T D N
pt020408_POPTR_    C S V L N F G G K S C R L R W V N Y L R P G L K R G Q I T P Q E E G I I I E L H A L W G N K W S T I A R Y L P G R T D N
 
AT3G30210.1     E I K N Y W R T H Y K K N Q K S S S K Q D K V K K S L S R K Q Q Q V D L K P Q P Q A Q S E N H Q S Q L V S Q D H M N I D
pt003856_POPTR_    E I K N Y W R T H S K K K E K S S Q K Q L E K R K A Q I L K Q E E E H Q Q - H L Q Q Q Q Q Q Q Q Q Q L E A G D - M N M V
pt020408_POPTR_    E I K N Y W R T H F K K K D K S S Q K Q - E K R K A L I L E Q E V Q H - - - - - - - - H Q Q Q Q Q Q L E A G E - M K M V
 
AT3G30210.1     N - - D H - - - N I A S S L Y Y P T S V F D D K L - - Y M P Q S V A T T S S D H S M I D E G H L W G S L W N L D E D D P
pt003856_POPTR_    N T I A H E K M H G A P E M - - M Y P T V E D Q C L P V M S Q D V V S W - A D S V V E D Y Y R L W G G F W N L D - D H P
pt020408_POPTR_    N T I D H V K M H E A Q E M Y F M Y H N L E D Q C S P V M T Q D V A S W - A D F V V E D Y Y G L W G G L W N L D - D H P
 
AT3G30210.1     H S F G G G S G Q G T A A D I D E K F P D S G I E A P S C G S G D Y S Y T G V Y M G G Y I F
pt003856_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt020408_POPTR_    Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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