Input
| Putative repression domain
|
|
AT3G30210.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt018250 |
not found in 212aa |
AT3G30210.1 |
1st_1st |
0.430830039 |
Ia |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT3G30210.1 ---MLDWGVQGHHQKHDHDIYQQQHQQQGCRKGPWTLEEDKLLAEYVTSHGEGRWSTVAK
pt018250_POPTR_ MVAMMGRGI----------------AEQGWRKGPWTPEEDKLLSEYVSLNGEGRWSSVSR
*:. *: :** ****** ******:***: :******:*::
AT3G30210.1 CAGLNRSGKSCRLRWVNYLRPGLKRGQITPQEEGIILELHSLWGNKWSTIARYLPGRTDN
pt018250_POPTR_ CSGLNRSGKSCRLRWVNYLRPGLKRGQITPQEEGIIIELHALWGNKWSTIARYLPGRTDN
*:**********************************:***:*******************
AT3G30210.1 EIKNYWRTHYKKNQKSSSKQDKVKKSLSRKQQQVDLKPQPQAQSENHQSQLVSQ-DHMNI
pt018250_POPTR_ EIKNYWRTHFKKKDKSSQKQEK-RNALILKQE---VQQQQQQQLEAGEMKMVNTIDHVKM
*********:**::***.**:* :::* **: :: * * * * : ::*. **:::
AT3G30210.1 DNDHNIASSLYYPTSVFDDKL--YMPQSVATTSSDHSMIDEGHLWGSLWNLDEDDPHSFG
pt018250_POPTR_ HE----AQEMYFMYHNLEDQCSPVMTQDAASW-ADFVVEDYYGLWGGLWNLD-DHPQD--
.: *..:*: ::*: *.*..*: :*. : * ***.***** *.*:.
AT3G30210.1 GGSGQGTAADIDEKFPDSGIEAPSCGSGDYSYTGVYMGGYIF
pt018250_POPTR_ ------------------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT3G30210.1 |
- |
- |
- |
M |
L |
D |
W |
G |
V |
Q |
G |
H |
H |
Q |
K |
H |
D |
H |
D |
I |
Y |
Q |
Q |
Q |
H |
Q |
Q |
Q |
G |
C |
R |
K |
G |
P |
W |
T |
L |
E |
E |
D |
K |
L |
L |
A |
E |
Y |
V |
T |
S |
H |
G |
E |
G |
R |
W |
S |
T |
V |
A |
K |
pt018250_POPTR_ |
M |
V |
A |
M |
M |
G |
R |
G |
I |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
A |
E |
Q |
G |
W |
R |
K |
G |
P |
W |
T |
P |
E |
E |
D |
K |
L |
L |
S |
E |
Y |
V |
S |
L |
N |
G |
E |
G |
R |
W |
S |
S |
V |
S |
R |
|
AT3G30210.1 |
C |
A |
G |
L |
N |
R |
S |
G |
K |
S |
C |
R |
L |
R |
W |
V |
N |
Y |
L |
R |
P |
G |
L |
K |
R |
G |
Q |
I |
T |
P |
Q |
E |
E |
G |
I |
I |
L |
E |
L |
H |
S |
L |
W |
G |
N |
K |
W |
S |
T |
I |
A |
R |
Y |
L |
P |
G |
R |
T |
D |
N |
pt018250_POPTR_ |
C |
S |
G |
L |
N |
R |
S |
G |
K |
S |
C |
R |
L |
R |
W |
V |
N |
Y |
L |
R |
P |
G |
L |
K |
R |
G |
Q |
I |
T |
P |
Q |
E |
E |
G |
I |
I |
I |
E |
L |
H |
A |
L |
W |
G |
N |
K |
W |
S |
T |
I |
A |
R |
Y |
L |
P |
G |
R |
T |
D |
N |
|
AT3G30210.1 |
E |
I |
K |
N |
Y |
W |
R |
T |
H |
Y |
K |
K |
N |
Q |
K |
S |
S |
S |
K |
Q |
D |
K |
V |
K |
K |
S |
L |
S |
R |
K |
Q |
Q |
Q |
V |
D |
L |
K |
P |
Q |
P |
Q |
A |
Q |
S |
E |
N |
H |
Q |
S |
Q |
L |
V |
S |
Q |
- |
D |
H |
M |
N |
I |
pt018250_POPTR_ |
E |
I |
K |
N |
Y |
W |
R |
T |
H |
F |
K |
K |
K |
D |
K |
S |
S |
Q |
K |
Q |
E |
K |
- |
R |
N |
A |
L |
I |
L |
K |
Q |
E |
- |
- |
- |
V |
Q |
Q |
Q |
Q |
Q |
Q |
Q |
L |
E |
A |
G |
E |
M |
K |
M |
V |
N |
T |
I |
D |
H |
V |
K |
M |
|
AT3G30210.1 |
D |
N |
D |
H |
N |
I |
A |
S |
S |
L |
Y |
Y |
P |
T |
S |
V |
F |
D |
D |
K |
L |
- |
- |
Y |
M |
P |
Q |
S |
V |
A |
T |
T |
S |
S |
D |
H |
S |
M |
I |
D |
E |
G |
H |
L |
W |
G |
S |
L |
W |
N |
L |
D |
E |
D |
D |
P |
H |
S |
F |
G |
pt018250_POPTR_ |
H |
E |
- |
- |
- |
- |
A |
Q |
E |
M |
Y |
F |
M |
Y |
H |
N |
L |
E |
D |
Q |
C |
S |
P |
V |
M |
T |
Q |
D |
A |
A |
S |
W |
- |
A |
D |
F |
V |
V |
E |
D |
Y |
Y |
G |
L |
W |
G |
G |
L |
W |
N |
L |
D |
- |
D |
H |
P |
Q |
D |
- |
- |
|
AT3G30210.1 |
G |
G |
S |
G |
Q |
G |
T |
A |
A |
D |
I |
D |
E |
K |
F |
P |
D |
S |
G |
I |
E |
A |
P |
S |
C |
G |
S |
G |
D |
Y |
S |
Y |
T |
G |
V |
Y |
M |
G |
G |
Y |
I |
F |
pt018250_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
|