fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G30210.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018250 not found in 212aa AT3G30210.1 1st_1st 0.430830039 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G30210.1     ---MLDWGVQGHHQKHDHDIYQQQHQQQGCRKGPWTLEEDKLLAEYVTSHGEGRWSTVAK
pt018250_POPTR_ MVAMMGRGI----------------AEQGWRKGPWTPEEDKLLSEYVSLNGEGRWSSVSR
                   *:. *:                 :** ****** ******:***: :******:*::

AT3G30210.1     CAGLNRSGKSCRLRWVNYLRPGLKRGQITPQEEGIILELHSLWGNKWSTIARYLPGRTDN
pt018250_POPTR_ CSGLNRSGKSCRLRWVNYLRPGLKRGQITPQEEGIIIELHALWGNKWSTIARYLPGRTDN
                *:**********************************:***:*******************

AT3G30210.1     EIKNYWRTHYKKNQKSSSKQDKVKKSLSRKQQQVDLKPQPQAQSENHQSQLVSQ-DHMNI
pt018250_POPTR_ EIKNYWRTHFKKKDKSSQKQEK-RNALILKQE---VQQQQQQQLEAGEMKMVNTIDHVKM
                *********:**::***.**:* :::*  **:   :: * * * *  : ::*.  **:::

AT3G30210.1     DNDHNIASSLYYPTSVFDDKL--YMPQSVATTSSDHSMIDEGHLWGSLWNLDEDDPHSFG
pt018250_POPTR_ HE----AQEMYFMYHNLEDQCSPVMTQDAASW-ADFVVEDYYGLWGGLWNLD-DHPQD--
                .:    *..:*:    ::*:    *.*..*:  :*. : *   ***.***** *.*:.  

AT3G30210.1     GGSGQGTAADIDEKFPDSGIEAPSCGSGDYSYTGVYMGGYIF
pt018250_POPTR_ ------------------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT3G30210.1     - - - M L D W G V Q G H H Q K H D H D I Y Q Q Q H Q Q Q G C R K G P W T L E E D K L L A E Y V T S H G E G R W S T V A K
pt018250_POPTR_    M V A M M G R G I - - - - - - - - - - - - - - - - A E Q G W R K G P W T P E E D K L L S E Y V S L N G E G R W S S V S R
 
AT3G30210.1     C A G L N R S G K S C R L R W V N Y L R P G L K R G Q I T P Q E E G I I L E L H S L W G N K W S T I A R Y L P G R T D N
pt018250_POPTR_    C S G L N R S G K S C R L R W V N Y L R P G L K R G Q I T P Q E E G I I I E L H A L W G N K W S T I A R Y L P G R T D N
 
AT3G30210.1     E I K N Y W R T H Y K K N Q K S S S K Q D K V K K S L S R K Q Q Q V D L K P Q P Q A Q S E N H Q S Q L V S Q - D H M N I
pt018250_POPTR_    E I K N Y W R T H F K K K D K S S Q K Q E K - R N A L I L K Q E - - - V Q Q Q Q Q Q Q L E A G E M K M V N T I D H V K M
 
AT3G30210.1     D N D H N I A S S L Y Y P T S V F D D K L - - Y M P Q S V A T T S S D H S M I D E G H L W G S L W N L D E D D P H S F G
pt018250_POPTR_    H E - - - - A Q E M Y F M Y H N L E D Q C S P V M T Q D A A S W - A D F V V E D Y Y G L W G G L W N L D - D H P Q D - -
 
AT3G30210.1     G G S G Q G T A A D I D E K F P D S G I E A P S C G S G D Y S Y T G V Y M G G Y I F
pt018250_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
0