fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G30260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020213 not found in 285aa AT1G69120.1 1st_not 0.400447427 II
Sb024088 not found in 443aa AT1G69120.1 not_not 0.400447427 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G30260.1     -------------------------------MGRGRVQLRRIENKIRRQVTFSKRRTGLV
Sb024088_Sorbi1 SFLPRLPPPTRPHRHCCAESERERVGVEAAEMGRGPVQLRRIENKINRQVTFSKRRNGLL
Sb020213_Sorbi1 -------------------------------MGRGKVQLKRIENKINRQVTFSKRRSGLL
                                               **** ***:******.*********.**:

AT3G30260.1     KKAQEISVLCDAEVALIVFSPKGKLFEYSAGSSMERILDRYERSAYAGQDIPTPNLDSQG
Sb024088_Sorbi1 KKAHEISVLCDAEVALIVFSTKGKLYEYSSHSSMEGILERYQRYSFEERAVLDPTIEDQA
Sb020213_Sorbi1 KKAHEISVLCDAEVALIIFSTKGKLYEYSTDSCMDKILERYERYSYAEKVLISAESETQG
                ***:*************:**.****:***: *.*: **:**:* ::  : :  .  : *.

AT3G30260.1     ECSTECSKLLRMIDVLQRSLRHLRGEEVDGLSIRDLQGVEMQLDTALKKTRSRKNQLMVE
Sb024088_Sorbi1 NWGDEYVRLKSKLDALQKSQRQLLGEQLDSLTIKELQQLEQQLDSSLKHIRSRKNQLMFD
Sb020213_Sorbi1 NWCHEYRKLKAKVETIQKCQKHLMGEDLETLNLKELQQLEQQLESSLKHIRTRKSQLMLE
                :   *  :*   ::.:*:. ::* **::: *.:::** :* **:::**: *:**.***.:

AT3G30260.1     SIAQLQKKEKELKELKKQLTKKAGEREDFQTQNLSHDL-------ASLATPPFESPHELR
Sb024088_Sorbi1 SISELQKKEKALTDQNGVLQK-LMEAEKEKNNALMNAHLREQPNGASTSSPSLSPP----
Sb020213_Sorbi1 SISELQRKEKSLQEENKVLQKELAEKQKAQRQQVQRDQTQQQTSSSSSSF----------
                **::**:*** * : :  * *   * :. : : : .         :* :           

AT3G30260.1     RTISPPPPPLSSG-DTSQRDGVGEVAAGTLIRRTNAT-LPHWM-PQLTGE
Sb024088_Sorbi1 -VVPDSMPTLNIGPCQPRGAGKSEPGPSPAPAQANSGNLPPWMLRTVSNR
Sb020213_Sorbi1 -MIREAAPTTNIS-IFPVAAGGRVVEAAAAPPQARVG-LPPWMLSHLSG-
                  :  . *. . .   .   *     ...   ::.   ** **   ::.
BoxShade v3.31 C (beta, 970507) Output
AT3G30260.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G R G R V Q L R R I E N K I R R Q V T F S K R R T G L V
Sb024088_Sorbi1    S F L P R L P P P T R P H R H C C A E S E R E R V G V E A A E M G R G P V Q L R R I E N K I N R Q V T F S K R R N G L L
Sb020213_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G R G K V Q L K R I E N K I N R Q V T F S K R R S G L L
 
AT3G30260.1     K K A Q E I S V L C D A E V A L I V F S P K G K L F E Y S A G S S M E R I L D R Y E R S A Y A G Q D I P T P N L D S Q G
Sb024088_Sorbi1    K K A H E I S V L C D A E V A L I V F S T K G K L Y E Y S S H S S M E G I L E R Y Q R Y S F E E R A V L D P T I E D Q A
Sb020213_Sorbi1    K K A H E I S V L C D A E V A L I I F S T K G K L Y E Y S T D S C M D K I L E R Y E R Y S Y A E K V L I S A E S E T Q G
 
AT3G30260.1     E C S T E C S K L L R M I D V L Q R S L R H L R G E E V D G L S I R D L Q G V E M Q L D T A L K K T R S R K N Q L M V E
Sb024088_Sorbi1    N W G D E Y V R L K S K L D A L Q K S Q R Q L L G E Q L D S L T I K E L Q Q L E Q Q L D S S L K H I R S R K N Q L M F D
Sb020213_Sorbi1    N W C H E Y R K L K A K V E T I Q K C Q K H L M G E D L E T L N L K E L Q Q L E Q Q L E S S L K H I R T R K S Q L M L E
 
AT3G30260.1     S I A Q L Q K K E K E L K E L K K Q L T K K A G E R E D F Q T Q N L S H D L - - - - - - - A S L A T P P F E S P H E L R
Sb024088_Sorbi1    S I S E L Q K K E K A L T D Q N G V L Q K - L M E A E K E K N N A L M N A H L R E Q P N G A S T S S P S L S P P - - - -
Sb020213_Sorbi1    S I S E L Q R K E K S L Q E E N K V L Q K E L A E K Q K A Q R Q Q V Q R D Q T Q Q Q T S S S S S S F - - - - - - - - - -
 
AT3G30260.1     R T I S P P P P P L S S G - D T S Q R D G V G E V A A G T L I R R T N A T - L P H W M - P Q L T G E
Sb024088_Sorbi1    - V V P D S M P T L N I G P C Q P R G A G K S E P G P S P A P A Q A N S G N L P P W M L R T V S N R
Sb020213_Sorbi1    - M I R E A A P T T N I S - I F P V A A G G R V V E A A A A P P Q A R V G - L P P W M L S H L S G -
 
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