fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G30530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035172 not found in 214aa AT3G30530.1 not_1st 0.475694444 II
Gm022507 not found in 193aa AT3G30530.1 not_1st 0.475694444 II
Gm003838 not found in 151aa AT3G30530.1 not_1st 0.465277777 II
Gm050542 not found in 195aa AT3G30530.1 not_1st 0.458333333 II
Gm000832 not found in 198aa AT3G30530.1 not_1st 0.458333333 II
Pt019238 not found in 196aa AT3G30530.1 not_1st 0.46875 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G30530.1     MQPQTDVFSLHNYLNSSILQSPYPSNFPISTPFPTNGQNPYLLYGFQSPTNN--------
gm003838_Glyma0 MVPS--------------------------------------------------------
gm022507_Glyma0 MQARE-ITGLN------YLLPPDPC-----FNY-SMVQNTIPTFQLHKLSNQFYGLQKP-
pt019238_POPTR_ MQPNE-IAGLH------YLVPPNSSPYS--AHF-SMTQDNSQMFQFNQFTNQSYNFQ---
gm050542_Glyma1 MQARE-ITGLN------YLLPSDPCPYP--GHY-SMVQNTIPTFQLHKLSNQFYGLQN--
gm035172_Glyma1 MQTKEVVSSLS------YLLPSNPCSYPPSNNYTSMIQNSIPTFQFQRFSNQIYGCNNSH
gm000832_Glyma0 MVPSE-IRGVH------YLAPENPFLVP--PNF-SLLQSDIPNLHLNTLLSNFPNCH---
                * .                                                         

AT3G30530.1     -----------PQSMSLSSNNSTSDEAEEQQTNNNIINERKQRRMISNRESARRSRMRKQ
gm003838_Glyma0 ------HEFVVPPSSCLSN-NSTSDEADEIQF--NIIDERKHRRMISNRESARRSRMRKQ
gm022507_Glyma0 -PPQVLADFSPPQSSCISS-NSTSDEADEQQQ--SLINERKHRRMISNRESARRSRMRKQ
pt019238_POPTR_ -IPPQLQEFS-LQASCMSS-HSTSDEADEQQL--SLINERKQRRMISNRESARRSRMRKQ
gm050542_Glyma1 -PPKVLADFSPPQSSCISS-NSTSDEADEQQQ--SLINERKHRRMISNRESARRSRMRKQ
gm035172_Glyma1 NTTYQVPDFS-PQSSCISS-NSTSDEADDQNL--SLINERKHRRMLSNRESARRSRMRKQ
gm000832_Glyma0 -FPPSGHEFVVPPSSCLSS-NSTSDEADEIQF--NIIDERKHRRMISNRESARRSRMRKQ
                             : .:*. :******:: :   .:*:***:***:**************

AT3G30530.1     RHLDELWSQVMWLRIENHQLLDKLNNLSESHDKVLQENAQLKEETFELKQVISDMQIQSP
gm003838_Glyma0 KHLDELWSQVVRLRTENHSLIDKLNHVSESHDRVLQENARLKEEASDLRQMLADMQIGTS
gm022507_Glyma0 KHLDELWSQVVWLRNENHQLMDKLNHVSESHDKVAQENVQLREEASELRQMICDMQLHSP
pt019238_POPTR_ KHLDELWSQVVWLRNENHQLVDKVNHVSECHDQVVQENNQLKEEISELRQVLTDMQLSSP
gm050542_Glyma1 KHLDELWSQVVWLRNENHQLMDKLNHVSASQDKVVQENVQLREEASELRQMICDMQLHSP
gm035172_Glyma1 KHLDELWSQVVWLRNENHQLIDKLNHVSETHDQVLQENSQLKEEASELRQMIRDMQIHSP
gm000832_Glyma0 KHLDELWSQVVRLRTENHNLIDKLNHVSESHDRVLQENARLKEEASALRQMLADMQIGTA
                :*********: ** ***.*:**:*::*  :*:* *** :*:**   *:*:: ***: :.

AT3G30530.1     F-------------SC-------FRDD-----IIPIE--------
gm003838_Glyma0 F--ACT-MEDLEDLPCNT--SQLLKPD-PLN--ESITPA-DMIHE
gm022507_Glyma0 YHPPP--LSPIDD-DV----SPYVKSD------SSITDSLDLLG-
pt019238_POPTR_ Y--PS--LKGLEDITCD---TAYLRAE-SSN--QSITSSSDLLG-
gm050542_Glyma1 YHPPP--LSPIDD-DV----SPYVKSD------SSITDSLDLLG-
gm035172_Glyma1 CGGPNSFITPLEDHDVDHVPSAYLRSDDSSNQFNSCNNNMDLLG-
gm000832_Glyma0 F--ACT-MEDLEDLPCNT--SQ-LKPD-PLN--QSITPA-DMIHE
                                       .: :       .
BoxShade v3.31 C (beta, 970507) Output
AT3G30530.1     M Q P Q T D V F S L H N Y L N S S I L Q S P Y P S N F P I S T P F P T N G Q N P Y L L Y G F Q S P T N N - - - - - - - -
gm003838_Glyma0    M V P S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm022507_Glyma0    M Q A R E - I T G L N - - - - - - Y L L P P D P C - - - - - F N Y - S M V Q N T I P T F Q L H K L S N Q F Y G L Q K P -
pt019238_POPTR_    M Q P N E - I A G L H - - - - - - Y L V P P N S S P Y S - - A H F - S M T Q D N S Q M F Q F N Q F T N Q S Y N F Q - - -
gm050542_Glyma1    M Q A R E - I T G L N - - - - - - Y L L P S D P C P Y P - - G H Y - S M V Q N T I P T F Q L H K L S N Q F Y G L Q N - -
gm035172_Glyma1    M Q T K E V V S S L S - - - - - - Y L L P S N P C S Y P P S N N Y T S M I Q N S I P T F Q F Q R F S N Q I Y G C N N S H
gm000832_Glyma0    M V P S E - I R G V H - - - - - - Y L A P E N P F L V P - - P N F - S L L Q S D I P N L H L N T L L S N F P N C H - - -
 
AT3G30530.1     - - - - - - - - - - - P Q S M S L S S N N S T S D E A E E Q Q T N N N I I N E R K Q R R M I S N R E S A R R S R M R K Q
gm003838_Glyma0    - - - - - - H E F V V P P S S C L S N - N S T S D E A D E I Q F - - N I I D E R K H R R M I S N R E S A R R S R M R K Q
gm022507_Glyma0    - P P Q V L A D F S P P Q S S C I S S - N S T S D E A D E Q Q Q - - S L I N E R K H R R M I S N R E S A R R S R M R K Q
pt019238_POPTR_    - I P P Q L Q E F S - L Q A S C M S S - H S T S D E A D E Q Q L - - S L I N E R K Q R R M I S N R E S A R R S R M R K Q
gm050542_Glyma1    - P P K V L A D F S P P Q S S C I S S - N S T S D E A D E Q Q Q - - S L I N E R K H R R M I S N R E S A R R S R M R K Q
gm035172_Glyma1    N T T Y Q V P D F S - P Q S S C I S S - N S T S D E A D D Q N L - - S L I N E R K H R R M L S N R E S A R R S R M R K Q
gm000832_Glyma0    - F P P S G H E F V V P P S S C L S S - N S T S D E A D E I Q F - - N I I D E R K H R R M I S N R E S A R R S R M R K Q
 
AT3G30530.1     R H L D E L W S Q V M W L R I E N H Q L L D K L N N L S E S H D K V L Q E N A Q L K E E T F E L K Q V I S D M Q I Q S P
gm003838_Glyma0    K H L D E L W S Q V V R L R T E N H S L I D K L N H V S E S H D R V L Q E N A R L K E E A S D L R Q M L A D M Q I G T S
gm022507_Glyma0    K H L D E L W S Q V V W L R N E N H Q L M D K L N H V S E S H D K V A Q E N V Q L R E E A S E L R Q M I C D M Q L H S P
pt019238_POPTR_    K H L D E L W S Q V V W L R N E N H Q L V D K V N H V S E C H D Q V V Q E N N Q L K E E I S E L R Q V L T D M Q L S S P
gm050542_Glyma1    K H L D E L W S Q V V W L R N E N H Q L M D K L N H V S A S Q D K V V Q E N V Q L R E E A S E L R Q M I C D M Q L H S P
gm035172_Glyma1    K H L D E L W S Q V V W L R N E N H Q L I D K L N H V S E T H D Q V L Q E N S Q L K E E A S E L R Q M I R D M Q I H S P
gm000832_Glyma0    K H L D E L W S Q V V R L R T E N H N L I D K L N H V S E S H D R V L Q E N A R L K E E A S A L R Q M L A D M Q I G T A
 
AT3G30530.1     F - - - - - - - - - - - - - S C - - - - - - - F R D D - - - - - I I P I E - - - - - - - -
gm003838_Glyma0    F - - A C T - M E D L E D L P C N T - - S Q L L K P D - P L N - - E S I T P A - D M I H E
gm022507_Glyma0    Y H P P P - - L S P I D D - D V - - - - S P Y V K S D - - - - - - S S I T D S L D L L G -
pt019238_POPTR_    Y - - P S - - L K G L E D I T C D - - - T A Y L R A E - S S N - - Q S I T S S S D L L G -
gm050542_Glyma1    Y H P P P - - L S P I D D - D V - - - - S P Y V K S D - - - - - - S S I T D S L D L L G -
gm035172_Glyma1    C G G P N S F I T P L E D H D V D H V P S A Y L R S D D S S N Q F N S C N N N M D L L G -
gm000832_Glyma0    F - - A C T - M E D L E D L P C N T - - S Q - L K P D - P L N - - Q S I T P A - D M I H E
 
0