fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G30530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041671 not found in 200aa AT1G13600.1 not_not 0.440972222 III
Pt033625 not found in 200aa AT1G13600.1 not_not 0.430555555 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G30530.1     MQPQTDVFSLHNYLNSSILQSPYPSNFPI--STPFP--------TNGQN---PYLLYGFQ
pt033625_POPTR_ MLP-GELTGIR-YLTADQNLVPFPANFGMMQQSNIPSFHFNRLLSNLQNSSLPQPVYEFA
pt041671_POPTR_ MLP-GELTGIH-YIAPDQSLIPFPANFGMMQQSSIPAFHFNRLLNNLQSSSFPQPVREFT
                * *  :: .:: *: ..    *:*:** :  .: :*        .* *.   *  :  * 

AT3G30530.1     SPTNNPQSMSLSSNNSTSDEAEEQQTNNNIINERKQRRMISNRESARRSRMRKQRHLDEL
pt033625_POPTR_ -----PQSSSL-SNNSTSDESEEHQL--SIIDERKQRRMISNRESARRSRMRKQKHLDEL
pt041671_POPTR_ -----PQSSSL-SNNSTSDESEEHQL--SIIDERKQRRMISNRESARRSRMRKQKHLDEL
                     *** ** ********:**:*   .**:**********************:*****

AT3G30530.1     WSQVMWLRIENHQLLDKLNNLSESHDKVLQENAQLKEETFELKQVISDMQIQSPF--SCF
pt033625_POPTR_ WSQVVRLRTENHNLIDKLSHVSECHDRVLQENARLKQEASDFRQMLTDFQIGSPYTTTAL
pt041671_POPTR_ WTQVVRLRTENHNLIDKLNHVSECHDRVLQENARLKKEASDLRQMITDLQIGSPYTATAL
                *:**: ** ***:*:***.::**.**:******:**:*: :::*:::*:** **:  :.:

AT3G30530.1     RD-DIIPIE---------------------
pt033625_POPTR_ RDLEEVPCNTAHLRAESSNQSITSSVDLLH
pt041671_POPTR_ RDLEEVPCNTAHVRAESSNQSVTSSVDLLH
                ** : :* :
BoxShade v3.31 C (beta, 970507) Output
AT3G30530.1     M Q P Q T D V F S L H N Y L N S S I L Q S P Y P S N F P I - - S T P F P - - - - - - - - T N G Q N - - - P Y L L Y G F Q
pt033625_POPTR_    M L P - G E L T G I R - Y L T A D Q N L V P F P A N F G M M Q Q S N I P S F H F N R L L S N L Q N S S L P Q P V Y E F A
pt041671_POPTR_    M L P - G E L T G I H - Y I A P D Q S L I P F P A N F G M M Q Q S S I P A F H F N R L L N N L Q S S S F P Q P V R E F T
 
AT3G30530.1     S P T N N P Q S M S L S S N N S T S D E A E E Q Q T N N N I I N E R K Q R R M I S N R E S A R R S R M R K Q R H L D E L
pt033625_POPTR_    - - - - - P Q S S S L - S N N S T S D E S E E H Q L - - S I I D E R K Q R R M I S N R E S A R R S R M R K Q K H L D E L
pt041671_POPTR_    - - - - - P Q S S S L - S N N S T S D E S E E H Q L - - S I I D E R K Q R R M I S N R E S A R R S R M R K Q K H L D E L
 
AT3G30530.1     W S Q V M W L R I E N H Q L L D K L N N L S E S H D K V L Q E N A Q L K E E T F E L K Q V I S D M Q I Q S P F - - S C F
pt033625_POPTR_    W S Q V V R L R T E N H N L I D K L S H V S E C H D R V L Q E N A R L K Q E A S D F R Q M L T D F Q I G S P Y T T T A L
pt041671_POPTR_    W T Q V V R L R T E N H N L I D K L N H V S E C H D R V L Q E N A R L K K E A S D L R Q M I T D L Q I G S P Y T A T A L
 
AT3G30530.1     R D - D I I P I E - - - - - - - - - - - - - - - - - - - - -
pt033625_POPTR_    R D L E E V P C N T A H L R A E S S N Q S I T S S V D L L H
pt041671_POPTR_    R D L E E V P C N T A H V R A E S S N Q S V T S S V D L L H
 
0