fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G30530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm051143 not found in 220aa AT3G30530.1 1st_1st 0.482638888 Ia
Pt003451 not found in 193aa AT3G30530.1 1st_1st 0.493055555 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G30530.1     MQPQTDVFSLHNYLNSSILQSPYPSNFPISTPFPTNGQ---NPYLLYGFQ----------
pt003451_POPTR_ MQPSE-VTGLHYLVPSS--PSPYSANFSMSQNDSQMFQFT-NPS--YNSQ----------
gm051143_Glyma1 MQSREVVSGLNYLLPSN--PCPYPPN---NNNYTTMFQNNINPT--FQFQRFSNQIYGYN
                **.   * .*:  : *.   .**..*   .   .   *   **   :  *          

AT3G30530.1     ---------SPTN----NPQSMSLSSNNSTSDEAEEQQTNNNIINERKQRRMISNRESAR
pt003451_POPTR_ ---------IPSQVQEFSLQASCMSS-ISTSDEADEQQL--SLINERKQRRMVSNRESAR
gm051143_Glyma1 NINNTPYHKVPDL---FSPQSSCISS-NSTSDEADEQNL--SLINERKHRRMISNRESAR
                          *      . *: .:**  ******:**:   .:*****:***:*******

AT3G30530.1     RSRMRKQRHLDELWSQVMWLRIENHQLLDKLNNLSESHDKVLQENAQLKEETFELKQVIS
pt003451_POPTR_ RSRMRKQKHLDELWSQVVWFRNENHQLLDKLNHVSECHDRVVHENAQLKEETSGLRQILT
gm051143_Glyma1 RSRMRKQKHLDELWSQVVWLRNENHQLMDKLNHVSESHDQVMQENAQLKEQALELRQMIR
                *******:*********:*:* *****:****::**.**:*::*******::  *:*:: 

AT3G30530.1     DMQIQSPF--------------------SCF----------------RDDIIPIE
pt003451_POPTR_ DMQLNSPYP--LLKDLEDITCD------TAYLGSESSNQSITSSS----DLLG--
gm051143_Glyma1 DMQIHSPCPSSFITPLEDHHHDVDHVIPSAYLRSDSSNQLSNSCNNNMDDLLG--
                ***::**                     :.:                  *::
BoxShade v3.31 C (beta, 970507) Output
AT3G30530.1     M Q P Q T D V F S L H N Y L N S S I L Q S P Y P S N F P I S T P F P T N G Q - - - N P Y L L Y G F Q - - - - - - - - - -
pt003451_POPTR_    M Q P S E - V T G L H Y L V P S S - - P S P Y S A N F S M S Q N D S Q M F Q F T - N P S - - Y N S Q - - - - - - - - - -
gm051143_Glyma1    M Q S R E V V S G L N Y L L P S N - - P C P Y P P N - - - N N N Y T T M F Q N N I N P T - - F Q F Q R F S N Q I Y G Y N
 
AT3G30530.1     - - - - - - - - - S P T N - - - - N P Q S M S L S S N N S T S D E A E E Q Q T N N N I I N E R K Q R R M I S N R E S A R
pt003451_POPTR_    - - - - - - - - - I P S Q V Q E F S L Q A S C M S S - I S T S D E A D E Q Q L - - S L I N E R K Q R R M V S N R E S A R
gm051143_Glyma1    N I N N T P Y H K V P D L - - - F S P Q S S C I S S - N S T S D E A D E Q N L - - S L I N E R K H R R M I S N R E S A R
 
AT3G30530.1     R S R M R K Q R H L D E L W S Q V M W L R I E N H Q L L D K L N N L S E S H D K V L Q E N A Q L K E E T F E L K Q V I S
pt003451_POPTR_    R S R M R K Q K H L D E L W S Q V V W F R N E N H Q L L D K L N H V S E C H D R V V H E N A Q L K E E T S G L R Q I L T
gm051143_Glyma1    R S R M R K Q K H L D E L W S Q V V W L R N E N H Q L M D K L N H V S E S H D Q V M Q E N A Q L K E Q A L E L R Q M I R
 
AT3G30530.1     D M Q I Q S P F - - - - - - - - - - - - - - - - - - - - S C F - - - - - - - - - - - - - - - - R D D I I P I E
pt003451_POPTR_    D M Q L N S P Y P - - L L K D L E D I T C D - - - - - - T A Y L G S E S S N Q S I T S S S - - - - D L L G - -
gm051143_Glyma1    D M Q I H S P C P S S F I T P L E D H H H D V D H V I P S A Y L R S D S S N Q L S N S C N N N M D D L L G - -
 
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