fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G30530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb010912 not found in 169aa AT3G30530.1 1st_1st 0.3125 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G30530.1     MQP-----------------------QTDVFSLHNYLNSSILQSPYPSNFP------IST
Sb010912_Sorbi1 MYPAEIASVPYLSPASAASFKPHYHVATDDF-LYQYSN---LMLPHPSSYQDVAHLVLEA
                * *                        ** * *::* *   *  *:**.:       :.:

AT3G30530.1     PFPTNGQNPYLLYGFQSPTNNPQSMSLSSNNSTSDEAEEQQTNNNIINERKQRRMISNRE
Sb010912_Sorbi1 SFPV------------------------GNKSNSEESDDYQ--RSLAEERRKRRMISNRE
                .**.                        .*:*.*:*::: *  ..: :**::********

AT3G30530.1     SARRSRMRKQRHLDELWSQVMWLRIENHQLLDKLNNLSESHDKVLQENAQLKEETFELKQ
Sb010912_Sorbi1 SARRSRMRKQKQLSELWAQVVHLRSTNRQLLDQLNHVIRDCDRVQHENSQLRDEQTKLQQ
                **********::*.***:**: **  *:****:**:: .. *:* :**:**::*  :*:*

AT3G30530.1     VISDMQIQ-------SPFSCFRDDIIPIE
Sb010912_Sorbi1 QLEKLPLETTESGVMSPDS----------
                 :..: ::       ** *
BoxShade v3.31 C (beta, 970507) Output
AT3G30530.1     M Q P - - - - - - - - - - - - - - - - - - - - - - - Q T D V F S L H N Y L N S S I L Q S P Y P S N F P - - - - - - I S T
Sb010912_Sorbi1    M Y P A E I A S V P Y L S P A S A A S F K P H Y H V A T D D F - L Y Q Y S N - - - L M L P H P S S Y Q D V A H L V L E A
 
AT3G30530.1     P F P T N G Q N P Y L L Y G F Q S P T N N P Q S M S L S S N N S T S D E A E E Q Q T N N N I I N E R K Q R R M I S N R E
Sb010912_Sorbi1    S F P V - - - - - - - - - - - - - - - - - - - - - - - - G N K S N S E E S D D Y Q - - R S L A E E R R K R R M I S N R E
 
AT3G30530.1     S A R R S R M R K Q R H L D E L W S Q V M W L R I E N H Q L L D K L N N L S E S H D K V L Q E N A Q L K E E T F E L K Q
Sb010912_Sorbi1    S A R R S R M R K Q K Q L S E L W A Q V V H L R S T N R Q L L D Q L N H V I R D C D R V Q H E N S Q L R D E Q T K L Q Q
 
AT3G30530.1     V I S D M Q I Q - - - - - - - S P F S C F R D D I I P I E
Sb010912_Sorbi1    Q L E K L P L E T T E S G V M S P D S - - - - - - - - - -
 
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