fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G30530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt003451 not found in 193aa AT3G30530.1 1st_1st 0.493055555 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G30530.1     MQPQTDVFSLHNYLNSSILQSPYPSNFPISTPFPTNGQNPYLLYGFQSPTNNPQ------
pt003451_POPTR_ MQP-SEVTGLHYLVPSS--PSPYSANFSMS-------QNDSQMFQFTNPSYNSQIPSQVQ
                *** ::* .**  : **   ***.:**.:*       **   :: * .*: *.*      

AT3G30530.1     ----SMSLSSNNSTSDEAEEQQTNNNIINERKQRRMISNRESARRSRMRKQRHLDELWSQ
pt003451_POPTR_ EFSLQASCMSSISTSDEADEQQL--SLINERKQRRMVSNRESARRSRMRKQKHLDELWSQ
                    . *  *. ******:***   .:*********:**************:********

AT3G30530.1     VMWLRIENHQLLDKLNNLSESHDKVLQENAQLKEETFELKQVISDMQIQSPFSCFRD---
pt003451_POPTR_ VVWFRNENHQLLDKLNHVSECHDRVVHENAQLKEETSGLRQILTDMQLNSPYPLLKDLED
                *:*:* **********::**.**:*::*********  *:*:::***::**:. ::*   

AT3G30530.1     ---------------------DIIPIE
pt003451_POPTR_ ITCDTAYLGSESSNQSITSSSDLLG--
                                     *::
BoxShade v3.31 C (beta, 970507) Output
AT3G30530.1     M Q P Q T D V F S L H N Y L N S S I L Q S P Y P S N F P I S T P F P T N G Q N P Y L L Y G F Q S P T N N P Q - - - - - -
pt003451_POPTR_    M Q P - S E V T G L H Y L V P S S - - P S P Y S A N F S M S - - - - - - - Q N D S Q M F Q F T N P S Y N S Q I P S Q V Q
 
AT3G30530.1     - - - - S M S L S S N N S T S D E A E E Q Q T N N N I I N E R K Q R R M I S N R E S A R R S R M R K Q R H L D E L W S Q
pt003451_POPTR_    E F S L Q A S C M S S I S T S D E A D E Q Q L - - S L I N E R K Q R R M V S N R E S A R R S R M R K Q K H L D E L W S Q
 
AT3G30530.1     V M W L R I E N H Q L L D K L N N L S E S H D K V L Q E N A Q L K E E T F E L K Q V I S D M Q I Q S P F S C F R D - - -
pt003451_POPTR_    V V W F R N E N H Q L L D K L N H V S E C H D R V V H E N A Q L K E E T S G L R Q I L T D M Q L N S P Y P L L K D L E D
 
AT3G30530.1     - - - - - - - - - - - - - - - - - - - - - D I I P I E
pt003451_POPTR_    I T C D T A Y L G S E S S N Q S I T S S S D L L G - -
 
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