fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G30530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt003451 not found in 193aa AT3G30530.1 1st_1st 0.493055555 Ia
Pt019238 not found in 196aa AT3G30530.1 not_1st 0.46875 II
Pt041671 not found in 200aa AT1G13600.1 not_not 0.440972222 III
Pt033625 not found in 200aa AT1G13600.1 not_not 0.430555555 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G30530.1     MQPQTDVFSLHNYLNSSILQSPYPSNFPISTPFPTNGQNPYLLYGFQSPTNNPQSMSLS-
pt033625_POPTR_ MLP-GELTGIR-YLTADQNLVPFPANFGMMQ------QSNIPSFHFNRLLSNLQNSSLPQ
pt003451_POPTR_ MQP-SEVTGLH-YLVPSSP-SPYSANFSMSQ------NDS-QMF---QFTNPSYNSQIPS
pt041671_POPTR_ MLP-GELTGIH-YIAPDQSLIPFPANFGMMQ------QSSIPAFHFNRLLNNLQSSSFPQ
pt019238_POPTR_ MQP-NEIAGLH-YLVPPNS-SPYSAHFSMTQ------DNS-QMFQFNQFTNQSYNFQIPP
                * *  :: .:: *: .     *:.::* :        :.    :      .   . .:. 

AT3G30530.1     ------------SNNSTSDEAEEQQTNNNIINERKQRRMISNRESARRSRMRKQRHLDEL
pt033625_POPTR_ PVYEFAPQSSSLSNNSTSDESEEHQL--SIIDERKQRRMISNRESARRSRMRKQKHLDEL
pt003451_POPTR_ QVQEFSLQASCMSSISTSDEADEQQL--SLINERKQRRMVSNRESARRSRMRKQKHLDEL
pt041671_POPTR_ PVREFTPQSSSLSNNSTSDESEEHQL--SIIDERKQRRMISNRESARRSRMRKQKHLDEL
pt019238_POPTR_ QLQEFSLQASCMSSHSTSDEADEQQL--SLINERKQRRMISNRESARRSRMRKQKHLDEL
                            *. *****::*:*   .:*:*******:**************:*****

AT3G30530.1     WSQVMWLRIENHQLLDKLNNLSESHDKVLQENAQLKEETFELKQVISDMQIQSPFSC--F
pt033625_POPTR_ WSQVVRLRTENHNLIDKLSHVSECHDRVLQENARLKQEASDFRQMLTDFQIGSPYTTTAL
pt003451_POPTR_ WSQVVWFRNENHQLLDKLNHVSECHDRVVHENAQLKEETSGLRQILTDMQLNSPYPL--L
pt041671_POPTR_ WTQVVRLRTENHNLIDKLNHVSECHDRVLQENARLKKEASDLRQMITDLQIGSPYTATAL
pt019238_POPTR_ WSQVVWLRNENHQLVDKVNHVSECHDQVVQENNQLKEEISELRQVLTDMQLSSPYPS--L
                *:**: :* ***:*:**:.::**.**:*::** :**:*   ::*:::*:*: **:.   :

AT3G30530.1     RD------------------------DIIPIE
pt033625_POPTR_ RDLEEVPCNTAHLRAESSNQSITSSVDLLH--
pt003451_POPTR_ KDLEDITCDTAYLGSESSNQSITSSSDLLG--
pt041671_POPTR_ RDLEEVPCNTAHVRAESSNQSVTSSVDLLH--
pt019238_POPTR_ KGLEDITCDTAYLRAESSNQSITSSSDLLG--
                :.                        *::
BoxShade v3.31 C (beta, 970507) Output
AT3G30530.1     M Q P Q T D V F S L H N Y L N S S I L Q S P Y P S N F P I S T P F P T N G Q N P Y L L Y G F Q S P T N N P Q S M S L S -
pt033625_POPTR_    M L P - G E L T G I R - Y L T A D Q N L V P F P A N F G M M Q - - - - - - Q S N I P S F H F N R L L S N L Q N S S L P Q
pt003451_POPTR_    M Q P - S E V T G L H - Y L V P S S P - S P Y S A N F S M S Q - - - - - - N D S - Q M F - - - Q F T N P S Y N S Q I P S
pt041671_POPTR_    M L P - G E L T G I H - Y I A P D Q S L I P F P A N F G M M Q - - - - - - Q S S I P A F H F N R L L N N L Q S S S F P Q
pt019238_POPTR_    M Q P - N E I A G L H - Y L V P P N S - S P Y S A H F S M T Q - - - - - - D N S - Q M F Q F N Q F T N Q S Y N F Q I P P
 
AT3G30530.1     - - - - - - - - - - - - S N N S T S D E A E E Q Q T N N N I I N E R K Q R R M I S N R E S A R R S R M R K Q R H L D E L
pt033625_POPTR_    P V Y E F A P Q S S S L S N N S T S D E S E E H Q L - - S I I D E R K Q R R M I S N R E S A R R S R M R K Q K H L D E L
pt003451_POPTR_    Q V Q E F S L Q A S C M S S I S T S D E A D E Q Q L - - S L I N E R K Q R R M V S N R E S A R R S R M R K Q K H L D E L
pt041671_POPTR_    P V R E F T P Q S S S L S N N S T S D E S E E H Q L - - S I I D E R K Q R R M I S N R E S A R R S R M R K Q K H L D E L
pt019238_POPTR_    Q L Q E F S L Q A S C M S S H S T S D E A D E Q Q L - - S L I N E R K Q R R M I S N R E S A R R S R M R K Q K H L D E L
 
AT3G30530.1     W S Q V M W L R I E N H Q L L D K L N N L S E S H D K V L Q E N A Q L K E E T F E L K Q V I S D M Q I Q S P F S C - - F
pt033625_POPTR_    W S Q V V R L R T E N H N L I D K L S H V S E C H D R V L Q E N A R L K Q E A S D F R Q M L T D F Q I G S P Y T T T A L
pt003451_POPTR_    W S Q V V W F R N E N H Q L L D K L N H V S E C H D R V V H E N A Q L K E E T S G L R Q I L T D M Q L N S P Y P L - - L
pt041671_POPTR_    W T Q V V R L R T E N H N L I D K L N H V S E C H D R V L Q E N A R L K K E A S D L R Q M I T D L Q I G S P Y T A T A L
pt019238_POPTR_    W S Q V V W L R N E N H Q L V D K V N H V S E C H D Q V V Q E N N Q L K E E I S E L R Q V L T D M Q L S S P Y P S - - L
 
AT3G30530.1     R D - - - - - - - - - - - - - - - - - - - - - - - - D I I P I E
pt033625_POPTR_    R D L E E V P C N T A H L R A E S S N Q S I T S S V D L L H - -
pt003451_POPTR_    K D L E D I T C D T A Y L G S E S S N Q S I T S S S D L L G - -
pt041671_POPTR_    R D L E E V P C N T A H V R A E S S N Q S V T S S V D L L H - -
pt019238_POPTR_    K G L E D I T C D T A Y L R A E S S N Q S I T S S S D L L G - -
 
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