fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G30530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035172 not found in 214aa AT3G30530.1 not_1st 0.475694444 II
Gm022507 not found in 193aa AT3G30530.1 not_1st 0.475694444 II
Gm003838 not found in 151aa AT3G30530.1 not_1st 0.465277777 II
Gm050542 not found in 195aa AT3G30530.1 not_1st 0.458333333 II
Gm000832 not found in 198aa AT3G30530.1 not_1st 0.458333333 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G30530.1     MQPQTDVFSLHNYLNSSILQSPYPSNF--PISTPFPTNGQNPYL--LYGFQSPTNN----
gm035172_Glyma1 MQTKEVVSSLSYLLPSNPCSYPPSNNYTSMIQNSIPTFQFQRFSNQIYGCNNSHNTTYQV
gm000832_Glyma0 MVPSE-IRGVHYLAPENPFLVPP--NF-SLLQSDIPNLHLNTLLSNFPNCH----FPPSG
gm003838_Glyma0 MVPS--------------------------------------------------------
gm022507_Glyma0 MQARE-ITGLNYLLPPDPC-----FNY-SMVQNTIPTFQLHKLSNQFYGLQKP--PPQVL
gm050542_Glyma1 MQARE-ITGLNYLLPSDPCPYP--GHY-SMVQNTIPTFQLHKLSNQFYGLQN---PPKVL
                * .                                                         

AT3G30530.1     -----PQSMSLSSNNSTSDEAEEQQTNNNIINERKQRRMISNRESARRSRMRKQRHLDEL
gm035172_Glyma1 PDFS-PQSSCISS-NSTSDEADDQNL--SLINERKHRRMLSNRESARRSRMRKQKHLDEL
gm000832_Glyma0 HEFVVPPSSCLSS-NSTSDEADEIQF--NIIDERKHRRMISNRESARRSRMRKQKHLDEL
gm003838_Glyma0 HEFVVPPSSCLSN-NSTSDEADEIQF--NIIDERKHRRMISNRESARRSRMRKQKHLDEL
gm022507_Glyma0 ADFSPPQSSCISS-NSTSDEADEQQQ--SLINERKHRRMISNRESARRSRMRKQKHLDEL
gm050542_Glyma1 ADFSPPQSSCISS-NSTSDEADEQQQ--SLINERKHRRMISNRESARRSRMRKQKHLDEL
                     * * .:*. *******:: :   .:*:***:***:**************:*****

AT3G30530.1     WSQVMWLRIENHQLLDKLNNLSESHDKVLQENAQLKEETFELKQVISDMQIQSP------
gm035172_Glyma1 WSQVVWLRNENHQLIDKLNHVSETHDQVLQENSQLKEEASELRQMIRDMQIHSPCGGPNS
gm000832_Glyma0 WSQVVRLRTENHNLIDKLNHVSESHDRVLQENARLKEEASALRQMLADMQIGTA------
gm003838_Glyma0 WSQVVRLRTENHSLIDKLNHVSESHDRVLQENARLKEEASDLRQMLADMQIGTS------
gm022507_Glyma0 WSQVVWLRNENHQLMDKLNHVSESHDKVAQENVQLREEASELRQMICDMQLHSPYHPPP-
gm050542_Glyma1 WSQVVWLRNENHQLMDKLNHVSASQDKVVQENVQLREEASELRQMICDMQLHSPYHPPP-
                ****: ** ***.*:****::* ::*:* *** :*:**:  *:*:: ***: :.      

AT3G30530.1     FSCFRDDIIPIE----------------------------
gm035172_Glyma1 FITPLED-HDVDHVPSAYLRSDDSSNQFNSCNNNMDLLG-
gm000832_Glyma0 FACTMEDLEDLPCNTSQ-LKPD----PLNQSITPADMIHE
gm003838_Glyma0 FACTMEDLEDLPCNTSQLLKPD----PLNESITPADMIHE
gm022507_Glyma0 -LSPIDD--DV----SPYVKSD------SSITDSLDLLG-
gm050542_Glyma1 -LSPIDD--DV----SPYVKSD------SSITDSLDLLG-
                     :*   :
BoxShade v3.31 C (beta, 970507) Output
AT3G30530.1     M Q P Q T D V F S L H N Y L N S S I L Q S P Y P S N F - - P I S T P F P T N G Q N P Y L - - L Y G F Q S P T N N - - - -
gm035172_Glyma1    M Q T K E V V S S L S Y L L P S N P C S Y P P S N N Y T S M I Q N S I P T F Q F Q R F S N Q I Y G C N N S H N T T Y Q V
gm000832_Glyma0    M V P S E - I R G V H Y L A P E N P F L V P P - - N F - S L L Q S D I P N L H L N T L L S N F P N C H - - - - F P P S G
gm003838_Glyma0    M V P S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm022507_Glyma0    M Q A R E - I T G L N Y L L P P D P C - - - - - F N Y - S M V Q N T I P T F Q L H K L S N Q F Y G L Q K P - - P P Q V L
gm050542_Glyma1    M Q A R E - I T G L N Y L L P S D P C P Y P - - G H Y - S M V Q N T I P T F Q L H K L S N Q F Y G L Q N - - - P P K V L
 
AT3G30530.1     - - - - - P Q S M S L S S N N S T S D E A E E Q Q T N N N I I N E R K Q R R M I S N R E S A R R S R M R K Q R H L D E L
gm035172_Glyma1    P D F S - P Q S S C I S S - N S T S D E A D D Q N L - - S L I N E R K H R R M L S N R E S A R R S R M R K Q K H L D E L
gm000832_Glyma0    H E F V V P P S S C L S S - N S T S D E A D E I Q F - - N I I D E R K H R R M I S N R E S A R R S R M R K Q K H L D E L
gm003838_Glyma0    H E F V V P P S S C L S N - N S T S D E A D E I Q F - - N I I D E R K H R R M I S N R E S A R R S R M R K Q K H L D E L
gm022507_Glyma0    A D F S P P Q S S C I S S - N S T S D E A D E Q Q Q - - S L I N E R K H R R M I S N R E S A R R S R M R K Q K H L D E L
gm050542_Glyma1    A D F S P P Q S S C I S S - N S T S D E A D E Q Q Q - - S L I N E R K H R R M I S N R E S A R R S R M R K Q K H L D E L
 
AT3G30530.1     W S Q V M W L R I E N H Q L L D K L N N L S E S H D K V L Q E N A Q L K E E T F E L K Q V I S D M Q I Q S P - - - - - -
gm035172_Glyma1    W S Q V V W L R N E N H Q L I D K L N H V S E T H D Q V L Q E N S Q L K E E A S E L R Q M I R D M Q I H S P C G G P N S
gm000832_Glyma0    W S Q V V R L R T E N H N L I D K L N H V S E S H D R V L Q E N A R L K E E A S A L R Q M L A D M Q I G T A - - - - - -
gm003838_Glyma0    W S Q V V R L R T E N H S L I D K L N H V S E S H D R V L Q E N A R L K E E A S D L R Q M L A D M Q I G T S - - - - - -
gm022507_Glyma0    W S Q V V W L R N E N H Q L M D K L N H V S E S H D K V A Q E N V Q L R E E A S E L R Q M I C D M Q L H S P Y H P P P -
gm050542_Glyma1    W S Q V V W L R N E N H Q L M D K L N H V S A S Q D K V V Q E N V Q L R E E A S E L R Q M I C D M Q L H S P Y H P P P -
 
AT3G30530.1     F S C F R D D I I P I E - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm035172_Glyma1    F I T P L E D - H D V D H V P S A Y L R S D D S S N Q F N S C N N N M D L L G -
gm000832_Glyma0    F A C T M E D L E D L P C N T S Q - L K P D - - - - P L N Q S I T P A D M I H E
gm003838_Glyma0    F A C T M E D L E D L P C N T S Q L L K P D - - - - P L N E S I T P A D M I H E
gm022507_Glyma0    - L S P I D D - - D V - - - - S P Y V K S D - - - - - - S S I T D S L D L L G -
gm050542_Glyma1    - L S P I D D - - D V - - - - S P Y V K S D - - - - - - S S I T D S L D L L G -
 
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