fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G30530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm051143 not found in 220aa AT3G30530.1 1st_1st 0.482638888 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G30530.1     MQPQTDVFSLHNYLNSSILQSPYPSNFPISTPFPTNGQNPYL--------LYGFQSPTN-
gm051143_Glyma1 MQSR-EVVSGLNYLLPSN-PCPYPPNNNNYTTMFQNNINPTFQFQRFSNQIYGYNNINNT
                **.: :*.*  *** .*   .***.*    *.:  *. ** :        :**::. .* 

AT3G30530.1     ---------NPQSMSLSSNNSTSDEAEEQQTNNNIINERKQRRMISNRESARRSRMRKQR
gm051143_Glyma1 PYHKVPDLFSPQSSCISS-NSTSDEADEQ--NLSLINERKHRRMISNRESARRSRMRKQK
                         .*** .:** *******:**  * .:*****:******************:

AT3G30530.1     HLDELWSQVMWLRIENHQLLDKLNNLSESHDKVLQENAQLKEETFELKQVISDMQIQSPF
gm051143_Glyma1 HLDELWSQVVWLRNENHQLMDKLNHVSESHDQVMQENAQLKEQALELRQMIRDMQIHSP-
                *********:*** *****:****::*****:*:********:::**:*:* ****:** 

AT3G30530.1     SCFRDDIIPIE------------------------------------
gm051143_Glyma1 -CPSSFITPLEDHHHDVDHVIPSAYLRSDSSNQLSNSCNNNMDDLLG
                 *  . * *:*
BoxShade v3.31 C (beta, 970507) Output
AT3G30530.1     M Q P Q T D V F S L H N Y L N S S I L Q S P Y P S N F P I S T P F P T N G Q N P Y L - - - - - - - - L Y G F Q S P T N -
gm051143_Glyma1    M Q S R - E V V S G L N Y L L P S N - P C P Y P P N N N N Y T T M F Q N N I N P T F Q F Q R F S N Q I Y G Y N N I N N T
 
AT3G30530.1     - - - - - - - - - N P Q S M S L S S N N S T S D E A E E Q Q T N N N I I N E R K Q R R M I S N R E S A R R S R M R K Q R
gm051143_Glyma1    P Y H K V P D L F S P Q S S C I S S - N S T S D E A D E Q - - N L S L I N E R K H R R M I S N R E S A R R S R M R K Q K
 
AT3G30530.1     H L D E L W S Q V M W L R I E N H Q L L D K L N N L S E S H D K V L Q E N A Q L K E E T F E L K Q V I S D M Q I Q S P F
gm051143_Glyma1    H L D E L W S Q V V W L R N E N H Q L M D K L N H V S E S H D Q V M Q E N A Q L K E Q A L E L R Q M I R D M Q I H S P -
 
AT3G30530.1     S C F R D D I I P I E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm051143_Glyma1    - C P S S F I T P L E D H H H D V D H V I P S A Y L R S D S S N Q L S N S C N N N M D D L L G
 
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