fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G30530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm051143 not found in 220aa AT3G30530.1 1st_1st 0.482638888 Ia
Gm035172 not found in 214aa AT3G30530.1 not_1st 0.475694444 II
Gm022507 not found in 193aa AT3G30530.1 not_1st 0.475694444 II
Gm003838 not found in 151aa AT3G30530.1 not_1st 0.465277777 II
Gm050542 not found in 195aa AT3G30530.1 not_1st 0.458333333 II
Gm000832 not found in 198aa AT3G30530.1 not_1st 0.458333333 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G30530.1     MQPQTDVFSLHNYLNSSILQSPYPSNFPI-STPFPTNGQN---PYL--------LYGFQS
gm050542_Glyma1 MQARE-ITGLNYLLPSD------PCPYPG---HY-SMVQNTI-PTFQLHKLSNQFYGLQN
gm051143_Glyma1 MQSREVVSGLNYLLPSN------PCPYPPNNNNYTTMFQNNINPTFQFQRFSNQIYGYNN
gm022507_Glyma0 MQARE-ITGLNYLLPPD------PC---F---NY-SMVQNTI-PTFQLHKLSNQFYGLQK
gm000832_Glyma0 MVPSE-IRGVHYLAPEN------PFLVPP---NF-SLLQSDI-PNLHLNTLLSNFPNCHF
gm035172_Glyma1 MQTKEVVSSLSYLLPSN------PCSYPP-SNNYTSMIQNSI-PTFQFQRFSNQIYGCNN
gm003838_Glyma0 MVPS--------------------------------------------------------
                * .                                                         

AT3G30530.1     ----PT---NN----PQSMSLSSNNSTSDEAEEQQTNNNIINERKQRRMISNRESARRSR
gm050542_Glyma1 ----PPKVLAD-FSPPQSSCISS-NSTSDEADEQQQ--SLINERKHRRMISNRESARRSR
gm051143_Glyma1 INNTPYHKVPDLFS-PQSSCISS-NSTSDEADEQNL--SLINERKHRRMISNRESARRSR
gm022507_Glyma0 ---PPPQVLAD-FSPPQSSCISS-NSTSDEADEQQQ--SLINERKHRRMISNRESARRSR
gm000832_Glyma0 ----PP-SGHE-FVVPPSSCLSS-NSTSDEADEIQF--NIIDERKHRRMISNRESARRSR
gm035172_Glyma1 SHNTTY-QVPD-FS-PQSSCISS-NSTSDEADDQNL--SLINERKHRRMLSNRESARRSR
gm003838_Glyma0 ---------HE-FVVPPSSCLSN-NSTSDEADEIQF--NIIDERKHRRMISNRESARRSR
                          :    * * .:*. *******:: :   .:*:***:***:**********

AT3G30530.1     MRKQRHLDELWSQVMWLRIENHQLLDKLNNLSESHDKVLQENAQLKEETFELKQVISDMQ
gm050542_Glyma1 MRKQKHLDELWSQVVWLRNENHQLMDKLNHVSASQDKVVQENVQLREEASELRQMICDMQ
gm051143_Glyma1 MRKQKHLDELWSQVVWLRNENHQLMDKLNHVSESHDQVMQENAQLKEQALELRQMIRDMQ
gm022507_Glyma0 MRKQKHLDELWSQVVWLRNENHQLMDKLNHVSESHDKVAQENVQLREEASELRQMICDMQ
gm000832_Glyma0 MRKQKHLDELWSQVVRLRTENHNLIDKLNHVSESHDRVLQENARLKEEASALRQMLADMQ
gm035172_Glyma1 MRKQKHLDELWSQVVWLRNENHQLIDKLNHVSETHDQVLQENSQLKEEASELRQMIRDMQ
gm003838_Glyma0 MRKQKHLDELWSQVVRLRTENHSLIDKLNHVSESHDRVLQENARLKEEASDLRQMLADMQ
                ****:*********: ** ***.*:****::* ::*:* *** :*:*::  *:*:: ***

AT3G30530.1     IQSPF-------SCFRD-------------------------------DIIPIE
gm050542_Glyma1 LHSPYHPPP--LSPIDD---DV-----SPYVKSDS------SITDSL-DLLG--
gm051143_Glyma1 IHSPC--PSSFITPLEDHHHDVDHVIPSAYLRSDSSNQLSNSCNNNMDDLLG--
gm022507_Glyma0 LHSPYHPPP--LSPIDD---DV-----SPYVKSDS------SITDSL-DLLG--
gm000832_Glyma0 IGTAF------ACTMED-LEDLPCN-TSQ-LKPDPLNQ---SITPA--DMIHE-
gm035172_Glyma1 IHSPCGGPNSFITPLED--HDVDHV-PSAYLRSDDSSNQFNSCNNNM-DLLG--
gm003838_Glyma0 IGTSF------ACTMED-LEDLPCN-TSQLLKPDPLNE---SITPA--DMIHE-
                : :.          : *                               *::
BoxShade v3.31 C (beta, 970507) Output
AT3G30530.1     M Q P Q T D V F S L H N Y L N S S I L Q S P Y P S N F P I - S T P F P T N G Q N - - - P Y L - - - - - - - - L Y G F Q S
gm050542_Glyma1    M Q A R E - I T G L N Y L L P S D - - - - - - P C P Y P G - - - H Y - S M V Q N T I - P T F Q L H K L S N Q F Y G L Q N
gm051143_Glyma1    M Q S R E V V S G L N Y L L P S N - - - - - - P C P Y P P N N N N Y T T M F Q N N I N P T F Q F Q R F S N Q I Y G Y N N
gm022507_Glyma0    M Q A R E - I T G L N Y L L P P D - - - - - - P C - - - F - - - N Y - S M V Q N T I - P T F Q L H K L S N Q F Y G L Q K
gm000832_Glyma0    M V P S E - I R G V H Y L A P E N - - - - - - P F L V P P - - - N F - S L L Q S D I - P N L H L N T L L S N F P N C H F
gm035172_Glyma1    M Q T K E V V S S L S Y L L P S N - - - - - - P C S Y P P - S N N Y T S M I Q N S I - P T F Q F Q R F S N Q I Y G C N N
gm003838_Glyma0    M V P S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G30530.1     - - - - P T - - - N N - - - - P Q S M S L S S N N S T S D E A E E Q Q T N N N I I N E R K Q R R M I S N R E S A R R S R
gm050542_Glyma1    - - - - P P K V L A D - F S P P Q S S C I S S - N S T S D E A D E Q Q Q - - S L I N E R K H R R M I S N R E S A R R S R
gm051143_Glyma1    I N N T P Y H K V P D L F S - P Q S S C I S S - N S T S D E A D E Q N L - - S L I N E R K H R R M I S N R E S A R R S R
gm022507_Glyma0    - - - P P P Q V L A D - F S P P Q S S C I S S - N S T S D E A D E Q Q Q - - S L I N E R K H R R M I S N R E S A R R S R
gm000832_Glyma0    - - - - P P - S G H E - F V V P P S S C L S S - N S T S D E A D E I Q F - - N I I D E R K H R R M I S N R E S A R R S R
gm035172_Glyma1    S H N T T Y - Q V P D - F S - P Q S S C I S S - N S T S D E A D D Q N L - - S L I N E R K H R R M L S N R E S A R R S R
gm003838_Glyma0    - - - - - - - - - H E - F V V P P S S C L S N - N S T S D E A D E I Q F - - N I I D E R K H R R M I S N R E S A R R S R
 
AT3G30530.1     M R K Q R H L D E L W S Q V M W L R I E N H Q L L D K L N N L S E S H D K V L Q E N A Q L K E E T F E L K Q V I S D M Q
gm050542_Glyma1    M R K Q K H L D E L W S Q V V W L R N E N H Q L M D K L N H V S A S Q D K V V Q E N V Q L R E E A S E L R Q M I C D M Q
gm051143_Glyma1    M R K Q K H L D E L W S Q V V W L R N E N H Q L M D K L N H V S E S H D Q V M Q E N A Q L K E Q A L E L R Q M I R D M Q
gm022507_Glyma0    M R K Q K H L D E L W S Q V V W L R N E N H Q L M D K L N H V S E S H D K V A Q E N V Q L R E E A S E L R Q M I C D M Q
gm000832_Glyma0    M R K Q K H L D E L W S Q V V R L R T E N H N L I D K L N H V S E S H D R V L Q E N A R L K E E A S A L R Q M L A D M Q
gm035172_Glyma1    M R K Q K H L D E L W S Q V V W L R N E N H Q L I D K L N H V S E T H D Q V L Q E N S Q L K E E A S E L R Q M I R D M Q
gm003838_Glyma0    M R K Q K H L D E L W S Q V V R L R T E N H S L I D K L N H V S E S H D R V L Q E N A R L K E E A S D L R Q M L A D M Q
 
AT3G30530.1     I Q S P F - - - - - - - S C F R D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D I I P I E
gm050542_Glyma1    L H S P Y H P P P - - L S P I D D - - - D V - - - - - S P Y V K S D S - - - - - - S I T D S L - D L L G - -
gm051143_Glyma1    I H S P C - - P S S F I T P L E D H H H D V D H V I P S A Y L R S D S S N Q L S N S C N N N M D D L L G - -
gm022507_Glyma0    L H S P Y H P P P - - L S P I D D - - - D V - - - - - S P Y V K S D S - - - - - - S I T D S L - D L L G - -
gm000832_Glyma0    I G T A F - - - - - - A C T M E D - L E D L P C N - T S Q - L K P D P L N Q - - - S I T P A - - D M I H E -
gm035172_Glyma1    I H S P C G G P N S F I T P L E D - - H D V D H V - P S A Y L R S D D S S N Q F N S C N N N M - D L L G - -
gm003838_Glyma0    I G T S F - - - - - - A C T M E D - L E D L P C N - T S Q L L K P D P L N E - - - S I T P A - - D M I H E -
 
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