fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G44350.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034070 not found in 244aa AT5G22380.1 1st_not 0.527896995 II
Pt030347 not found in 266aa AT5G22380.1 1st_not 0.545064377 II
Pt021927 not found in 227aa AT3G44350.2 not_1st 0.495708154 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G44350.2     M-------------------GEELSVGFRFYPTEVELLTYYLRIQLGGGNAT-IHSLIPI
pt021927_POPTR_ --------------------MEELPLGYRFYPTEEELVSFYLHNKLEGTRQE-LQRVIPE
pt030347_POPTR_ MLIQLRLTREQDTRTRTRTRMEELPLGYRFYPTEEELISFYLHNKLGGGRQERLQRVIPD
gm034070_Glyma1 --------------------MDDLPPGFRFYPTEEELVFFYLHNQLEGQIHD-TSRVIPV
                                     ::*. *:****** **: :**: :* *        :** 

AT3G44350.2     LDVFSVEPTQLPNLAGERCRGDAEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPV
pt021927_POPTR_ ISIYDIEPGDLPQLSGELCRGNTEQWFFFTPRQAREARGGRPNRTTATGYWKATGSPGYV
pt030347_POPTR_ ISIYDIEPWDLPKLSGELCQGDTEQWFFFTPRQEREARGGRPNRTTASGYWKATGSPGYV
gm034070_Glyma1 IDINGVEPWNLPSLAGELCRGDTEQWFFFSPRQEREARGGRPNRTTASGYWKATGSPGHV
                :.: .:** :**.*:** *:*::***:** *** ********.***.:********** *

AT3G44350.2     FSPDNRVIGVKKTMVFYTGKAPTGRKTKWKMNEYKAVET--ASVSTIPKLRPEFSICRIY
pt021927_POPTR_ YSSDNRVIGLKKTMVFYIGKAPTGRKTKWKMNEYRAIEVHESSRNATSKLRHEFSLCRVY
pt030347_POPTR_ YSSDNRVIGLKKTMVFYTGKAPRGRKTKWKMNEYRAIEVHESSSNATPKLRHEFSLCRVY
gm034070_Glyma1 YSSDNKVIGMKKTMVFYKGKAPTGRKTKWKMHEYKAIEHSDQSNTAPPKLRHEFSLCRVY
                :*.**:***:******* **** ********:**:*:*    * .: .*** ***:**:*

AT3G44350.2     IKSGSSRAFDRRPTEAYAIERNLP-SN--GVETSS------RATISTSPETSHSGGN-QV
pt021927_POPTR_ VVSGSFRAFDRRPLEA----------------------DPITVEMTSSPETSYSGGD-HV
pt030347_POPTR_ VVSGSFRAFDRRPLEAVTRETQLL-GD--GATTSAQGPDP-TVDMTSSPETSYSVED-HV
gm034070_Glyma1 VISGSFRSFDRRPLDMPRVELRVVDGDRGAASTSA------QAQQRSSSHTSHSGGDAHV
                : *** *:***** :                           .   :*..**:*  : :*

AT3G44350.2     DLPVNATTITQSISDMVDELSQPFWEWE-QMNWS
pt021927_POPTR_ DYPGTAASA--NWGLILHGNDRNNWIGPAQIDL-
pt030347_POPTR_ DHPGTAASA--NWGSV-DGLEPPAWEWPGQLDWP
gm034070_Glyma1 TDAGAGSSGT-NWNAS-NRVEEPLWEWE-QLDWP
                  .  .::   . .   .  .   *    *::
BoxShade v3.31 C (beta, 970507) Output
AT3G44350.2     M - - - - - - - - - - - - - - - - - - - G E E L S V G F R F Y P T E V E L L T Y Y L R I Q L G G G N A T - I H S L I P I
pt021927_POPTR_    - - - - - - - - - - - - - - - - - - - - M E E L P L G Y R F Y P T E E E L V S F Y L H N K L E G T R Q E - L Q R V I P E
pt030347_POPTR_    M L I Q L R L T R E Q D T R T R T R T R M E E L P L G Y R F Y P T E E E L I S F Y L H N K L G G G R Q E R L Q R V I P D
gm034070_Glyma1    - - - - - - - - - - - - - - - - - - - - M D D L P P G F R F Y P T E E E L V F F Y L H N Q L E G Q I H D - T S R V I P V
 
AT3G44350.2     L D V F S V E P T Q L P N L A G E R C R G D A E Q W I F F V P R Q E R E A R G G R P S R T T G S G Y W K A T G S P G P V
pt021927_POPTR_    I S I Y D I E P G D L P Q L S G E L C R G N T E Q W F F F T P R Q A R E A R G G R P N R T T A T G Y W K A T G S P G Y V
pt030347_POPTR_    I S I Y D I E P W D L P K L S G E L C Q G D T E Q W F F F T P R Q E R E A R G G R P N R T T A S G Y W K A T G S P G Y V
gm034070_Glyma1    I D I N G V E P W N L P S L A G E L C R G D T E Q W F F F S P R Q E R E A R G G R P N R T T A S G Y W K A T G S P G H V
 
AT3G44350.2     F S P D N R V I G V K K T M V F Y T G K A P T G R K T K W K M N E Y K A V E T - - A S V S T I P K L R P E F S I C R I Y
pt021927_POPTR_    Y S S D N R V I G L K K T M V F Y I G K A P T G R K T K W K M N E Y R A I E V H E S S R N A T S K L R H E F S L C R V Y
pt030347_POPTR_    Y S S D N R V I G L K K T M V F Y T G K A P R G R K T K W K M N E Y R A I E V H E S S S N A T P K L R H E F S L C R V Y
gm034070_Glyma1    Y S S D N K V I G M K K T M V F Y K G K A P T G R K T K W K M H E Y K A I E H S D Q S N T A P P K L R H E F S L C R V Y
 
AT3G44350.2     I K S G S S R A F D R R P T E A Y A I E R N L P - S N - - G V E T S S - - - - - - R A T I S T S P E T S H S G G N - Q V
pt021927_POPTR_    V V S G S F R A F D R R P L E A - - - - - - - - - - - - - - - - - - - - - - D P I T V E M T S S P E T S Y S G G D - H V
pt030347_POPTR_    V V S G S F R A F D R R P L E A V T R E T Q L L - G D - - G A T T S A Q G P D P - T V D M T S S P E T S Y S V E D - H V
gm034070_Glyma1    V I S G S F R S F D R R P L D M P R V E L R V V D G D R G A A S T S A - - - - - - Q A Q Q R S S S H T S H S G G D A H V
 
AT3G44350.2     D L P V N A T T I T Q S I S D M V D E L S Q P F W E W E - Q M N W S
pt021927_POPTR_    D Y P G T A A S A - - N W G L I L H G N D R N N W I G P A Q I D L -
pt030347_POPTR_    D H P G T A A S A - - N W G S V - D G L E P P A W E W P G Q L D W P
gm034070_Glyma1    T D A G A G S S G T - N W N A S - N R V E E P L W E W E - Q L D W P
 
0