fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G44350.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt005710 not found in 268aa AT5G22380.1 not_not 0.418454935 III
Pt043838 not found in 287aa AT5G22380.1 not_not 0.401287553 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G44350.2     -----------------------------MGEELSVGFRFYPTEVELLTYYLRIQLGGGN
pt005710_POPTR_ -----------MI---------------------PPGFRFYPTEEELVSFYLHNKLEARR
pt043838_POPTR_ MSLVFFLRGGVMIFYLDSINEEKYHRHIYLCDENKIGFRFYPTEEELVSFYLRNKLEARR
                                                    ******** **:::**: :* . .

AT3G44350.2     A----TIHSLIPILDVFSVEPTQLPNLAGERCRGDAEQWIFFVPRQEREARGGRPSRTTG
pt005710_POPTR_ EDLLRVMDRLIPVLDIYEFNPWELPQFSGDLCHGDPEEWFFFIRRQESEARGGRPKRLTS
pt043838_POPTR_ EDLLRVMDRLIPVLDIYGFNPWELPR---DLCHGDPEECFFFIPRQKSEAHGGRPKRLTA
                     .:. ***:**:: .:* :**.   : *:**.*: :**: **: **:****.* *.

AT3G44350.2     SGYWKATGSPGPVFSPD-NRVIGVKKTMVFYTGKAPTGRKTKWKMNEYKAVE---TASVS
pt005710_POPTR_ SGYWKATGSPSPVYSSNSNRSIGEKRTMVFYEGRAPRGRKTEWKMNEFKAMEEEAEASYS
pt043838_POPTR_ TGYWKATGSPGSVYSSKSNRCIGEKRTMVFYNGRAPNGQKTDWKMNEYKAIKEE-EASSS
                :*********..*:*.. ** ** *:***** *:** *:**.*****:**::    ** *

AT3G44350.2     T--IPKLRPEFSICRIYIKSGSSRAFDRRPTEAYAIERNLPSNGVETSSRATISTSPETS
pt005710_POPTR_ NGGHPRLRQEFSLCRVYKKSKFVRAFDRRPS------------GVEMGTEMRAQATPGNE
pt043838_POPTR_ SGAYPKLREEFSLCRVYKKSNFVRAFDRRPL------------GVENMVQMRAQTAPDDG
                .   *:** ***:**:* **   *******             ***   .   .::*   

AT3G44350.2     HSGGNQVDLPVNATTITQS-----------------ISDMV--DELSQPFWEWEQMNWS-
pt005710_POPTR_ VTSSSSHQNPSTAETVPCSHAILSLGDHGQTFQTGESSYTASIDTDNEPIWDWEQLEWCY
pt043838_POPTR_ AT--AFHQSPSAGE-ITCSHDSSTSGHHGQPFQTGEISDMA---IDNEPIWEWEQLDQYW
                 :     : *  .  :. *                  *  .     .:*:*:***::   

AT3G44350.2     ------------
pt005710_POPTR_ SDRDNIEKVQSA
pt043838_POPTR_ SKQGHSDQQ---
BoxShade v3.31 C (beta, 970507) Output
AT3G44350.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G E E L S V G F R F Y P T E V E L L T Y Y L R I Q L G G G N
pt005710_POPTR_    - - - - - - - - - - - M I - - - - - - - - - - - - - - - - - - - - - P P G F R F Y P T E E E L V S F Y L H N K L E A R R
pt043838_POPTR_    M S L V F F L R G G V M I F Y L D S I N E E K Y H R H I Y L C D E N K I G F R F Y P T E E E L V S F Y L R N K L E A R R
 
AT3G44350.2     A - - - - T I H S L I P I L D V F S V E P T Q L P N L A G E R C R G D A E Q W I F F V P R Q E R E A R G G R P S R T T G
pt005710_POPTR_    E D L L R V M D R L I P V L D I Y E F N P W E L P Q F S G D L C H G D P E E W F F F I R R Q E S E A R G G R P K R L T S
pt043838_POPTR_    E D L L R V M D R L I P V L D I Y G F N P W E L P R - - - D L C H G D P E E C F F F I P R Q K S E A H G G R P K R L T A
 
AT3G44350.2     S G Y W K A T G S P G P V F S P D - N R V I G V K K T M V F Y T G K A P T G R K T K W K M N E Y K A V E - - - T A S V S
pt005710_POPTR_    S G Y W K A T G S P S P V Y S S N S N R S I G E K R T M V F Y E G R A P R G R K T E W K M N E F K A M E E E A E A S Y S
pt043838_POPTR_    T G Y W K A T G S P G S V Y S S K S N R C I G E K R T M V F Y N G R A P N G Q K T D W K M N E Y K A I K E E - E A S S S
 
AT3G44350.2     T - - I P K L R P E F S I C R I Y I K S G S S R A F D R R P T E A Y A I E R N L P S N G V E T S S R A T I S T S P E T S
pt005710_POPTR_    N G G H P R L R Q E F S L C R V Y K K S K F V R A F D R R P S - - - - - - - - - - - - G V E M G T E M R A Q A T P G N E
pt043838_POPTR_    S G A Y P K L R E E F S L C R V Y K K S N F V R A F D R R P L - - - - - - - - - - - - G V E N M V Q M R A Q T A P D D G
 
AT3G44350.2     H S G G N Q V D L P V N A T T I T Q S - - - - - - - - - - - - - - - - - I S D M V - - D E L S Q P F W E W E Q M N W S -
pt005710_POPTR_    V T S S S S H Q N P S T A E T V P C S H A I L S L G D H G Q T F Q T G E S S Y T A S I D T D N E P I W D W E Q L E W C Y
pt043838_POPTR_    A T - - A F H Q S P S A G E - I T C S H D S S T S G H H G Q P F Q T G E I S D M A - - - I D N E P I W E W E Q L D Q Y W
 
AT3G44350.2     - - - - - - - - - - - -
pt005710_POPTR_    S D R D N I E K V Q S A
pt043838_POPTR_    S K Q G H S D Q Q - - -
 
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