fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G44350.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb011640 not found in 331aa AT3G44350.2 1st_1st 0.384120171 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G44350.2     -MGEE------------------LSVGFRFYPTEVELLTYYLRIQLGGGNATIHSLIPIL
Sb011640_Sorbi1 MMMESHGGSGGGGGGGGGGSDPLLAPGFRFYPTEEELLTFYLRHRLAGTRPVVEHLIPVV
                 * *.                  *: ******** ****:*** :*.* ...:. ***::

AT3G44350.2     DVFSVEPTQLPNLAGERCRGDAEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVF
Sb011640_Sorbi1 DIYSYHPSELRAMAGAASVSDPEQWFFFCPRAERELHGGRPARTTPSGYWKATGSPSYVY
                *::* .*::*  :**  . .*.***:** ** *** :****:*** **********. *:

AT3G44350.2     SP------DNRVIGVKKTMVFYTGKAPTGRKTKWKMNEYKAVETASV-----STIP-KLR
Sb011640_Sorbi1 SSSSSPTANNRVIGEKRTMVFYQGRAPTGNKTPWKMNEYKAVADADADDHAPAGAPIMLR
                *.      :***** *:***** *:****.** *********  *..     :  *  **

AT3G44350.2     PEFSICRIYIKSGSSRAFDRRPTEAYAIERNLPSNGV-----------------------
Sb011640_Sorbi1 NEFSVCRVYISTGTLRSFDRRP--------HPPSGGLAAVHCGYQRQQQLQPLLPPPAAA
                 ***:**:**.:*: *:*****        : **.*:                       

AT3G44350.2     ----ETSS---------------------------RATISTSPETSHSG----GNQVDLP
Sb011640_Sorbi1 AAAAKTTSLHNQQQTMMLAAVVVDDDSAADNNGRRRHAVEHSHDSSSSGSRGVGGGVDGA
                    :*:*                           * ::. * ::* **    *. ** .

AT3G44350.2     VNATT--------ITQSISD------MVDELSQPFWEWEQMNWS
Sb011640_Sorbi1 EDAATAIDWDWNSLIPPVDDDDLAFTGVDDLTRVIWPHN-----
                 :*:*        :  .:.*       **:*:: :*  :
BoxShade v3.31 C (beta, 970507) Output
AT3G44350.2     - M G E E - - - - - - - - - - - - - - - - - - L S V G F R F Y P T E V E L L T Y Y L R I Q L G G G N A T I H S L I P I L
Sb011640_Sorbi1    M M M E S H G G S G G G G G G G G G G S D P L L A P G F R F Y P T E E E L L T F Y L R H R L A G T R P V V E H L I P V V
 
AT3G44350.2     D V F S V E P T Q L P N L A G E R C R G D A E Q W I F F V P R Q E R E A R G G R P S R T T G S G Y W K A T G S P G P V F
Sb011640_Sorbi1    D I Y S Y H P S E L R A M A G A A S V S D P E Q W F F F C P R A E R E L H G G R P A R T T P S G Y W K A T G S P S Y V Y
 
AT3G44350.2     S P - - - - - - D N R V I G V K K T M V F Y T G K A P T G R K T K W K M N E Y K A V E T A S V - - - - - S T I P - K L R
Sb011640_Sorbi1    S S S S S P T A N N R V I G E K R T M V F Y Q G R A P T G N K T P W K M N E Y K A V A D A D A D D H A P A G A P I M L R
 
AT3G44350.2     P E F S I C R I Y I K S G S S R A F D R R P T E A Y A I E R N L P S N G V - - - - - - - - - - - - - - - - - - - - - - -
Sb011640_Sorbi1    N E F S V C R V Y I S T G T L R S F D R R P - - - - - - - - H P P S G G L A A V H C G Y Q R Q Q Q L Q P L L P P P A A A
 
AT3G44350.2     - - - - E T S S - - - - - - - - - - - - - - - - - - - - - - - - - - - R A T I S T S P E T S H S G - - - - G N Q V D L P
Sb011640_Sorbi1    A A A A K T T S L H N Q Q Q T M M L A A V V V D D D S A A D N N G R R R H A V E H S H D S S S S G S R G V G G G V D G A
 
AT3G44350.2     V N A T T - - - - - - - - I T Q S I S D - - - - - - M V D E L S Q P F W E W E Q M N W S
Sb011640_Sorbi1    E D A A T A I D W D W N S L I P P V D D D D L A F T G V D D L T R V I W P H N - - - - -
 
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