fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G44350.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034070 not found in 244aa AT5G22380.1 1st_not 0.527896995 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G44350.2     MGEELSVGFRFYPTEVELLTYYLRIQLGGGNATIHSLIPILDVFSVEPTQLPNLAGERCR
gm034070_Glyma1 -MDDLPPGFRFYPTEEELVFFYLHNQLEGQIHDTSRVIPVIDINGVEPWNLPSLAGELCR
                  ::*. ******** **: :**: ** *       :**::*: .*** :**.**** **

AT3G44350.2     GDAEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGK
gm034070_Glyma1 GDTEQWFFFSPRQEREARGGRPNRTTASGYWKATGSPGHVYSSDNKVIGMKKTMVFYKGK
                **:***:** ************.***.*********** *:*.**:***:*******.**

AT3G44350.2     APTGRKTKWKMNEYKAVETASVSTI--PKLRPEFSICRIYIKSGSSRAFDRRPTEAYAIE
gm034070_Glyma1 APTGRKTKWKMHEYKAIEHSDQSNTAPPKLRHEFSLCRVYVISGSFRSFDRRPLDMPRVE
                ***********:****:* :. *.   **** ***:**:*: *** *:***** :   :*

AT3G44350.2     RNL---PSNGVETSSRATISTSPETSHSGGNQ--VDLPVNATTITQSISDMVDELSQPFW
gm034070_Glyma1 LRVVDGDRGAASTSAQAQQRSSSHTSHSGGDAHVTDAGAGSSGTNWNASNRVEE---PLW
                 .:     ....**::*   :*..******:   .*  ..::  . . *: *:*   *:*

AT3G44350.2     EWEQMNWS
gm034070_Glyma1 EWEQLDWP
                ****::*.
BoxShade v3.31 C (beta, 970507) Output
AT3G44350.2     M G E E L S V G F R F Y P T E V E L L T Y Y L R I Q L G G G N A T I H S L I P I L D V F S V E P T Q L P N L A G E R C R
gm034070_Glyma1    - M D D L P P G F R F Y P T E E E L V F F Y L H N Q L E G Q I H D T S R V I P V I D I N G V E P W N L P S L A G E L C R
 
AT3G44350.2     G D A E Q W I F F V P R Q E R E A R G G R P S R T T G S G Y W K A T G S P G P V F S P D N R V I G V K K T M V F Y T G K
gm034070_Glyma1    G D T E Q W F F F S P R Q E R E A R G G R P N R T T A S G Y W K A T G S P G H V Y S S D N K V I G M K K T M V F Y K G K
 
AT3G44350.2     A P T G R K T K W K M N E Y K A V E T A S V S T I - - P K L R P E F S I C R I Y I K S G S S R A F D R R P T E A Y A I E
gm034070_Glyma1    A P T G R K T K W K M H E Y K A I E H S D Q S N T A P P K L R H E F S L C R V Y V I S G S F R S F D R R P L D M P R V E
 
AT3G44350.2     R N L - - - P S N G V E T S S R A T I S T S P E T S H S G G N Q - - V D L P V N A T T I T Q S I S D M V D E L S Q P F W
gm034070_Glyma1    L R V V D G D R G A A S T S A Q A Q Q R S S S H T S H S G G D A H V T D A G A G S S G T N W N A S N R V E E - - - P L W
 
AT3G44350.2     E W E Q M N W S
gm034070_Glyma1    E W E Q L D W P
 
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