fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G44460.1 QAYTVELELELNNLTE at 273/331 in AT3G44460.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm037852 not found in 299aa AT3G44460.1 1st_1st 0.319467554 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G44460.1     MSVFESETSNFHVYNNHEIQTQPQMQTFLSEEEPVGRQNSILSLTLDEIQMKSGKSFGAM
gm037852_Glyma1 MSLQQP---------NQEVPLQEPEATF----SQLSKQNSILSLTLDEFYCKNGKSLGSM
                **: :.         *:*:  *    **    . :.:***********:  *.***:*:*

AT3G44460.1     NMDEFLANLWTTVEEN---------DNEGGGAHNDGEKPAVLPRQGSLSLPVPLCKKTVD
gm037852_Glyma1 NMDEFLSSIWNSDDNNQVNPPLPTLDEAAKGKSVIATEPTTISQPGSLSVPPPICKKTVD
                ******:.:*.: ::*         *: . *    . :*:.:.: ****:* *:******

AT3G44460.1     EVWLEIQNGVQQHPPSSNSGQNSAENIRRQQTLGEITLEDFLVKAGVVQEPLKTTMRMSS
gm037852_Glyma1 EVWSQIHKSQPDHNDANNSLARNEPLLKRQQTLGEMTLEDFLVKAGVVQE--------SS
                *** :*::.  :*  :.**  ..   ::*******:**************        **

AT3G44460.1     SDFGYNPEFGVGLHCQNQ-NNYGDNRSVYSENRPFYSVLGESSSCMTGNGRSNQYLTGLD
gm037852_Glyma1 SLFKSS------LLPQNQIGNIASNGPLGAGYR-LRPVIGTGSK---SNGKGN-------
                * *  .      *  *** .* ..* .: :  * : .*:* .*.   .**:.*       

AT3G44460.1     AFRIKKRIIDGPPEILMERRQRRMIKNRESAARSRARRQAYTVELELELNNLTEENTKLK
gm037852_Glyma1 ----RKRIIDGPPEVVVERRQRRMLKNRESAARSRARRQAYTVELEAELNLLKEENEKLK
                    :*********:::*******:********************* *** *.*** ***

AT3G44460.1     EIVEENEKKRRQEIISRSKQVTKEKSGDKLRKIRRMASAGW
gm037852_Glyma1 QTLAEAERKRKQEISQRKHTTMAQKRTENLRAMRRPLSASW
                : : * *:**:*** .*.: .  :*  ::** :**  **.*
BoxShade v3.31 C (beta, 970507) Output
AT3G44460.1     M S V F E S E T S N F H V Y N N H E I Q T Q P Q M Q T F L S E E E P V G R Q N S I L S L T L D E I Q M K S G K S F G A M
gm037852_Glyma1    M S L Q Q P - - - - - - - - - N Q E V P L Q E P E A T F - - - - S Q L S K Q N S I L S L T L D E F Y C K N G K S L G S M
 
AT3G44460.1     N M D E F L A N L W T T V E E N - - - - - - - - - D N E G G G A H N D G E K P A V L P R Q G S L S L P V P L C K K T V D
gm037852_Glyma1    N M D E F L S S I W N S D D N N Q V N P P L P T L D E A A K G K S V I A T E P T T I S Q P G S L S V P P P I C K K T V D
 
AT3G44460.1     E V W L E I Q N G V Q Q H P P S S N S G Q N S A E N I R R Q Q T L G E I T L E D F L V K A G V V Q E P L K T T M R M S S
gm037852_Glyma1    E V W S Q I H K S Q P D H N D A N N S L A R N E P L L K R Q Q T L G E M T L E D F L V K A G V V Q E - - - - - - - - S S
 
AT3G44460.1     S D F G Y N P E F G V G L H C Q N Q - N N Y G D N R S V Y S E N R P F Y S V L G E S S S C M T G N G R S N Q Y L T G L D
gm037852_Glyma1    S L F K S S - - - - - - L L P Q N Q I G N I A S N G P L G A G Y R - L R P V I G T G S K - - - S N G K G N - - - - - - -
 
AT3G44460.1     A F R I K K R I I D G P P E I L M E R R Q R R M I K N R E S A A R S R A R R Q A Y T V E L E L E L N N L T E E N T K L K
gm037852_Glyma1    - - - - R K R I I D G P P E V V V E R R Q R R M L K N R E S A A R S R A R R Q A Y T V E L E A E L N L L K E E N E K L K
 
AT3G44460.1     E I V E E N E K K R R Q E I I S R S K Q V T K E K S G D K L R K I R R M A S A G W
gm037852_Glyma1    Q T L A E A E R K R K Q E I S Q R K H T T M A Q K R T E N L R A M R R P L S A S W
 
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