fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G44785.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023474 SPGFKLLLFRFLLFS in 95/876 AT1G27650.1 1st_not 0.628930817 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G44785.1     MVEHLASIYGTEKDRVNCPFYFK--IGVCRNGDRCSRLYTK-------------------
Sb023474_Sorbi1 --------QLQQPVRLAMPTVLQQPAGCSRQSHRGTCLHLRCLPLAVPLLNLCPPLLAAF
                           :  *:  *  ::   * .*:..* : *: :                   

AT3G44785.1     -------------PSISPTLLLS-------------------------------------
Sb023474_Sorbi1 PPRALAPAPGSPAPTAAPVAVVAAVSLAAPAAATTATVVVVIVMVIVTVPGPGRATVAAV
                             *: :*. :::                                     

AT3G44785.1     ------------------------------------------------------------
Sb023474_Sorbi1 RARAAAAAAMAPVGAMQVAEQLPPQVPSDLLDVHEVAVSAAVAAVLLELAAGGLPEVRHG
                                                                            

AT3G44785.1     ---------------NTYQQGR--------------------------------------
Sb023474_Sorbi1 GELGDDGAARVVAALQSLQRARRLLLLAELHVHVPDHVVREVVAHVEALDLAVLAQLLED
                               :: *:.*                                      

AT3G44785.1     -----LKQFLDP-----------------------------------VQS----------
Sb023474_Sorbi1 VLVEVLEVLLDPLRVDGVPLRVHARGDHVRPLVHVAQQQRRGDGRLVVQAGAPVAVAARA
                     *: :***                                   **:          

AT3G44785.1     -------------REKDPKKKF---------------
Sb023474_Sorbi1 DLEVEGAVHAVLLRAKDGRKMLSHGCLIPPLPARFVA
                             * ** :* :
BoxShade v3.31 C (beta, 970507) Output
AT3G44785.1     M V E H L A S I Y G T E K D R V N C P F Y F K - - I G V C R N G D R C S R L Y T K - - - - - - - - - - - - - - - - - - -
Sb023474_Sorbi1    - - - - - - - - Q L Q Q P V R L A M P T V L Q Q P A G C S R Q S H R G T C L H L R C L P L A V P L L N L C P P L L A A F
 
AT3G44785.1     - - - - - - - - - - - - - P S I S P T L L L S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb023474_Sorbi1    P P R A L A P A P G S P A P T A A P V A V V A A V S L A A P A A A T T A T V V V V I V M V I V T V P G P G R A T V A A V
 
AT3G44785.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb023474_Sorbi1    R A R A A A A A A M A P V G A M Q V A E Q L P P Q V P S D L L D V H E V A V S A A V A A V L L E L A A G G L P E V R H G
 
AT3G44785.1     - - - - - - - - - - - - - - - N T Y Q Q G R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb023474_Sorbi1    G E L G D D G A A R V V A A L Q S L Q R A R R L L L L A E L H V H V P D H V V R E V V A H V E A L D L A V L A Q L L E D
 
AT3G44785.1     - - - - - L K Q F L D P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V Q S - - - - - - - - - -
Sb023474_Sorbi1    V L V E V L E V L L D P L R V D G V P L R V H A R G D H V R P L V H V A Q Q Q R R G D G R L V V Q A G A P V A V A A R A
 
AT3G44785.1     - - - - - - - - - - - - - R E K D P K K K F - - - - - - - - - - - - - - -
Sb023474_Sorbi1    D L E V E G A V H A V L L R A K D G R K M L S H G C L I P P L P A R F V A
 
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