fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G46130.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm038001 not found in 201aa AT3G46130.1 not_not 0.421052631 III
Gm038000 not found in 201aa AT3G46130.1 not_not 0.421052631 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G46130.2     MTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSPTSSF
gm038000_Glyma1 MTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYWRTLMRKKAQEKKRGEAASSSP
gm038001_Glyma1 MTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYWRTLMRKKAQEKKRGEAASSSP
                *************:*******:******************* **********  :.:** 

AT3G46130.2     SNCSSSSVTTTTTNTQDTSCHSRKSSGEVSFYDTGGSR----STREMNQ--ENEDVYSLD
gm038000_Glyma1 T--PSSVDSSISSNNHAVDPHASKKAGEESFYDTGGDNGVIAATQDQGQKGDQQGLFSMD
gm038001_Glyma1 T--PSSVDSSISSNNHAVDPHASKKAGEESFYDTGGDNGVIAATQDQGQKGDQQGLFSMD
                :  .**  :: ::*.: .. *: *.:** *******..    :*:: .*  :::.::*:*

AT3G46130.2     DIWREIDHSAV---NIIKPVK--DIYSEQSHCLSY-PNLASP-SWE-SSLDSIWNMDADK
gm038000_Glyma1 DIWKDIDNMSEENNTTLQPVSVYDGHSEEGCNFSCPPQVPSPSSWEYSSSDPLWVMDEE-
gm038001_Glyma1 DIWKDIDNMSEENNTTLQPVSVYDGHSEEGCNFSCPPQVPSPSSWEYSSSDPLWVMDEE-
                ***::**: :    . ::**.  * :**:.  :*  *::.** *** ** *.:* ** : 

AT3G46130.2     SKISSYFANDQFPFCFQHSRSPWSSG------
gm038000_Glyma1 ----SLFC----PLSEEPYFSCYAQGTVFLTG
gm038001_Glyma1 ----SLFC----PLSEEPYFSCYAQGTVFLTG
                    * *.    *:. :   * ::.*
BoxShade v3.31 C (beta, 970507) Output
AT3G46130.2     M T P Q E E R L V L E L H A K W G N R W S K I A R K L P G R T D N E I K N Y W R T H M R K K A Q E K K R P V S P T S S F
gm038000_Glyma1    M T P Q E E R L V L E L H S K W G N R W S R I A R K L P G R T D N E I K N Y W R T L M R K K A Q E K K R G E A A S S S P
gm038001_Glyma1    M T P Q E E R L V L E L H S K W G N R W S R I A R K L P G R T D N E I K N Y W R T L M R K K A Q E K K R G E A A S S S P
 
AT3G46130.2     S N C S S S S V T T T T T N T Q D T S C H S R K S S G E V S F Y D T G G S R - - - - S T R E M N Q - - E N E D V Y S L D
gm038000_Glyma1    T - - P S S V D S S I S S N N H A V D P H A S K K A G E E S F Y D T G G D N G V I A A T Q D Q G Q K G D Q Q G L F S M D
gm038001_Glyma1    T - - P S S V D S S I S S N N H A V D P H A S K K A G E E S F Y D T G G D N G V I A A T Q D Q G Q K G D Q Q G L F S M D
 
AT3G46130.2     D I W R E I D H S A V - - - N I I K P V K - - D I Y S E Q S H C L S Y - P N L A S P - S W E - S S L D S I W N M D A D K
gm038000_Glyma1    D I W K D I D N M S E E N N T T L Q P V S V Y D G H S E E G C N F S C P P Q V P S P S S W E Y S S S D P L W V M D E E -
gm038001_Glyma1    D I W K D I D N M S E E N N T T L Q P V S V Y D G H S E E G C N F S C P P Q V P S P S S W E Y S S S D P L W V M D E E -
 
AT3G46130.2     S K I S S Y F A N D Q F P F C F Q H S R S P W S S G - - - - - -
gm038000_Glyma1    - - - - S L F C - - - - P L S E E P Y F S C Y A Q G T V F L T G
gm038001_Glyma1    - - - - S L F C - - - - P L S E E P Y F S C Y A Q G T V F L T G
 
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