fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G46640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt021163 not found in 349aa AT3G46640.2 not_not 0.458752515 III
Pt031754 not found in 306aa AT3G46640.2 not_not 0.420523138 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G46640.1     MGEEVQMSDYDVSG-------DGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPE
pt021163_POPTR_ MGEEVKMSEYEINDGEENINGDDERVAVWEIGLPTPDDLTPLSQTLIPPELASAFSIFPE
pt031754_POPTR_ ------MSEYEIND-EDNINRDDERIDVWEMGLPTPYDLTPLSQLLIPPELASAFNISPE
                      **:*::..       *.:*:  **:***:  **:.**  ****:** **.* **

AT3G46640.1     RSRTIQDVNRASETTLSSLRG---GSSGPNTSSSNNNVEEE---------------DRVG
pt021163_POPTR_ PHRTPLDVNRACQTTLSNLRGQLNALSSINFKSFNETTGQTHDPIVVDLDNKTGAVDRDG
pt031754_POPTR_ PHRTPLDVNRASQNTLSNLHGHLNALSSNNFKSFNETT----------------------
                  **  *****.:.***.*:*   . *. * .* *:..                      

AT3G46640.1     SSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGTEDLSGKTLKRPRLVWTPQLHK
pt021163_POPTR_ S---GSEARKLRRVD-------SEEEDSALRTDNSAEDPSSAAARTLKRPRLVWTPQLHK
pt031754_POPTR_ ------------------------EADSALRTENWVDDPSSAAARTLKRPRLVWTPQLHK
                                        : ***: :::  ..... :.:***************

AT3G46640.1     RFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLTNEGPSASDK
pt021163_POPTR_ RFVDVVSHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSSEGPSASDQ
pt031754_POPTR_ RFVDVVGHLGMKNAVPKTIMQWMNVEGLTRENVASHLQKYRLYLKRKQGLSSEGPSASDQ
                ******.***:********** ************************ ***:.*******:

AT3G46640.1     LFSSTPVPPQSFQDIG-GGGGSSGNVGVPIPGAY-----GTQQMMQMPVYAHHMGMQGYH
pt021163_POPTR_ LFASTPL-PQSFPESSDGGGGGNGNFGIPIPMPYHHPA-TAGGMMPMPVYG-HMGMQMGN
pt031754_POPTR_ LFASTPV-PQSLHESG-GGSCGGGNFGMPIPMPYHHPATTAGGMMPMPVYG-HMGIQMVN
                **:***: ***: : . **. ..**.*:*** .*      :  ** ****. ***:*  :

AT3G46640.1     HQNHNHDPYHQNHRHH------HGAGGNGAFESNPYMMQQ----NKFGSMASYPSVGGGS
pt021163_POPTR_ NNGHNNNS-SDNHQHHQVSINGHQNGYNGNVVHGHMFQQRDWNGNHYGSYTHHPH--QVA
pt031754_POPTR_ DHVHNNNN-SNNYQHQQVSMNSHQNGYNGNVALLMGNKHRDWNGTNYGPYSHHPH--HAV
                .: **::   :*::*:      *  * ** .       ::    .::*. : :*      

AT3G46640.1     ANEN-
pt021163_POPTR_ PNDNM
pt031754_POPTR_ SNDNM
                .*:*
BoxShade v3.31 C (beta, 970507) Output
AT3G46640.1     M G E E V Q M S D Y D V S G - - - - - - - D G D R V S E W E M G L P S D E D L A S L S Y S L I P P N L A M A F S I T P E
pt021163_POPTR_    M G E E V K M S E Y E I N D G E E N I N G D D E R V A V W E I G L P T P D D L T P L S Q T L I P P E L A S A F S I F P E
pt031754_POPTR_    - - - - - - M S E Y E I N D - E D N I N R D D E R I D V W E M G L P T P Y D L T P L S Q L L I P P E L A S A F N I S P E
 
AT3G46640.1     R S R T I Q D V N R A S E T T L S S L R G - - - G S S G P N T S S S N N N V E E E - - - - - - - - - - - - - - - D R V G
pt021163_POPTR_    P H R T P L D V N R A C Q T T L S N L R G Q L N A L S S I N F K S F N E T T G Q T H D P I V V D L D N K T G A V D R D G
pt031754_POPTR_    P H R T P L D V N R A S Q N T L S N L H G H L N A L S S N N F K S F N E T T - - - - - - - - - - - - - - - - - - - - - -
 
AT3G46640.1     S S S P G S D S K K Q K T S N G D G D D G G G V D P D S A M A A E E G D S G T E D L S G K T L K R P R L V W T P Q L H K
pt021163_POPTR_    S - - - G S E A R K L R R V D - - - - - - - S E E E D S A L R T D N S A E D P S S A A A R T L K R P R L V W T P Q L H K
pt031754_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - E A D S A L R T E N W V D D P S S A A A R T L K R P R L V W T P Q L H K
 
AT3G46640.1     R F V D V V A H L G I K N A V P K T I M Q L M N V E G L T R E N V A S H L Q K Y R L Y L K R M Q G L T N E G P S A S D K
pt021163_POPTR_    R F V D V V S H L G I K N A V P K T I M Q L M N V E G L T R E N V A S H L Q K Y R L Y L K R M Q G L S S E G P S A S D Q
pt031754_POPTR_    R F V D V V G H L G M K N A V P K T I M Q W M N V E G L T R E N V A S H L Q K Y R L Y L K R K Q G L S S E G P S A S D Q
 
AT3G46640.1     L F S S T P V P P Q S F Q D I G - G G G G S S G N V G V P I P G A Y - - - - - G T Q Q M M Q M P V Y A H H M G M Q G Y H
pt021163_POPTR_    L F A S T P L - P Q S F P E S S D G G G G G N G N F G I P I P M P Y H H P A - T A G G M M P M P V Y G - H M G M Q M G N
pt031754_POPTR_    L F A S T P V - P Q S L H E S G - G G S C G G G N F G M P I P M P Y H H P A T T A G G M M P M P V Y G - H M G I Q M V N
 
AT3G46640.1     H Q N H N H D P Y H Q N H R H H - - - - - - H G A G G N G A F E S N P Y M M Q Q - - - - N K F G S M A S Y P S V G G G S
pt021163_POPTR_    N N G H N N N S - S D N H Q H H Q V S I N G H Q N G Y N G N V V H G H M F Q Q R D W N G N H Y G S Y T H H P H - - Q V A
pt031754_POPTR_    D H V H N N N N - S N N Y Q H Q Q V S M N S H Q N G Y N G N V A L L M G N K H R D W N G T N Y G P Y S H H P H - - H A V
 
AT3G46640.1     A N E N -
pt021163_POPTR_    P N D N M
pt031754_POPTR_    S N D N M
 
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