fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G46640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb026555 LGLPLCLCLCLCLCLC in 58/481 AT5G59570.1 1st_not 0.420523138 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G46640.1     MGEEVQMSDYDVSGDGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQD
Sb026555_Sorbi1 ----------------DRRSRYR-GRPAAVRKKRMSFVGV--------------------
                                ** *.:. * *:      :*:  :                    

AT3G46640.1     VNRASETTLSSLRGGSSGPNTSSSNNNVEEEDRVGSSSPGSDS-----------KKQKTS
Sb026555_Sorbi1 ------VVCCRLR------------------------VPSSSSCCCVVVVVVVVVRRLSA
                      .. . **                         *.*.*            :: ::

AT3G46640.1     NGDGDDGGGVDPDSAMAAEEGD-------------------SGTEDLSGKTLKRPRLVWT
Sb026555_Sorbi1 AGHGHH----------AADSGDVHAGWHGHLRLVHQGVRHRRGREDVVGR--GRP-LVGE
                 *.*..          **:.**                    * **: *:   ** **  

AT3G46640.1     P--------------------------QLHKRFVDVVAHLGIKNAVPKTIMQLMN-----
Sb026555_Sorbi1 PLHPLHVQPVLLQVAGHVLPRQPFHVHQLHDGLGHRVLDPQVRHHVHEPLVQLRRPHQPG
                *                          ***. : . * .  ::: * :.::** .     

AT3G46640.1     -------VEGLTRENVASHLQKYRLYL----------KR----MQGLTNEG--PSAS-DK
Sb026555_Sorbi1 TLAVGACVGGRRRRVAAAQGRRRRVRILVPPRVSRRRRRLRMGMEGREGGGAAPSAARRR
                       * *  *. .*:: :: *: :          :*    *:*  . *  ***:  :

AT3G46640.1     LFSSTPVPPQSFQDIGGGGGSSGNVGVPIPG----------AYGTQQMMQ----------
Sb026555_Sorbi1 RRRRAPQPRHR------GRRRAVHVQQRPPGLRRDAERRRQTRGNQRLRQRGQLVGAREP
                    :* * :       *   : :*    **          : *.*:: *          

AT3G46640.1     -MPVY---------AHHMGMQGYH----HQNHNHDP-------------YHQNHRHHHGA
Sb026555_Sorbi1 RLPLHHAAVVVAAVAHHVELVVVHGLLAHPNRWIPPTLHTCLIPKSIEQHRHRHRHRHRH
                 :*::         ***: :   *    * *:   *             :::.***:*  

AT3G46640.1     GGNGAFESNPYMMQQN-KFGSMASYPSV-------------------------GGG----
Sb026555_Sorbi1 SG------NPKSINQSIPIYTESSNPATRLRRFDRRRRVRRDRGQGRRYLCPWGGGRKRP
                .*      **  ::*.  : : :* *:.                         ***    

AT3G46640.1     -SANEN
Sb026555_Sorbi1 CSA---
                 **
BoxShade v3.31 C (beta, 970507) Output
AT3G46640.1     M G E E V Q M S D Y D V S G D G D R V S E W E M G L P S D E D L A S L S Y S L I P P N L A M A F S I T P E R S R T I Q D
Sb026555_Sorbi1    - - - - - - - - - - - - - - - - D R R S R Y R - G R P A A V R K K R M S F V G V - - - - - - - - - - - - - - - - - - - -
 
AT3G46640.1     V N R A S E T T L S S L R G G S S G P N T S S S N N N V E E E D R V G S S S P G S D S - - - - - - - - - - - K K Q K T S
Sb026555_Sorbi1    - - - - - - V V C C R L R - - - - - - - - - - - - - - - - - - - - - - - - V P S S S S C C C V V V V V V V V V R R L S A
 
AT3G46640.1     N G D G D D G G G V D P D S A M A A E E G D - - - - - - - - - - - - - - - - - - - S G T E D L S G K T L K R P R L V W T
Sb026555_Sorbi1    A G H G H H - - - - - - - - - - A A D S G D V H A G W H G H L R L V H Q G V R H R R G R E D V V G R - - G R P - L V G E
 
AT3G46640.1     P - - - - - - - - - - - - - - - - - - - - - - - - - - Q L H K R F V D V V A H L G I K N A V P K T I M Q L M N - - - - -
Sb026555_Sorbi1    P L H P L H V Q P V L L Q V A G H V L P R Q P F H V H Q L H D G L G H R V L D P Q V R H H V H E P L V Q L R R P H Q P G
 
AT3G46640.1     - - - - - - - V E G L T R E N V A S H L Q K Y R L Y L - - - - - - - - - - K R - - - - M Q G L T N E G - - P S A S - D K
Sb026555_Sorbi1    T L A V G A C V G G R R R R V A A A Q G R R R R V R I L V P P R V S R R R R R L R M G M E G R E G G G A A P S A A R R R
 
AT3G46640.1     L F S S T P V P P Q S F Q D I G G G G G S S G N V G V P I P G - - - - - - - - - - A Y G T Q Q M M Q - - - - - - - - - -
Sb026555_Sorbi1    R R R R A P Q P R H R - - - - - - G R R R A V H V Q Q R P P G L R R D A E R R R Q T R G N Q R L R Q R G Q L V G A R E P
 
AT3G46640.1     - M P V Y - - - - - - - - - A H H M G M Q G Y H - - - - H Q N H N H D P - - - - - - - - - - - - - Y H Q N H R H H H G A
Sb026555_Sorbi1    R L P L H H A A V V V A A V A H H V E L V V V H G L L A H P N R W I P P T L H T C L I P K S I E Q H R H R H R H R H R H
 
AT3G46640.1     G G N G A F E S N P Y M M Q Q N - K F G S M A S Y P S V - - - - - - - - - - - - - - - - - - - - - - - - - G G G - - - -
Sb026555_Sorbi1    S G - - - - - - N P K S I N Q S I P I Y T E S S N P A T R L R R F D R R R R V R R D R G Q G R R Y L C P W G G G R K R P
 
AT3G46640.1     - S A N E N
Sb026555_Sorbi1    C S A - - -
 
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