fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G46640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030852 not found in 323aa AT3G46640.2 1st_not 0.444668008 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G46640.1     MGEEVQMSDYDVSGDGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQD
gm030852_Glyma1 MGEEVKTSEY----DEERVMEWEAGLPTANDLTPLSQPLIPPELASAFSILPEPHRTLLD
                *****: *:*    * :** *** ***: :**:.** .****:** **** **  **: *

AT3G46640.1     VNRASETTLSSLRGGSSGPNT--SSSNNN----------VEEE-----DRVGSSSPGSDS
gm030852_Glyma1 VNRASRNTLSTLRGGGGSVHQAFSSSNNNHNYDGDGDGGVEEEEDDDDDRDGS---GPDS
                *****..***:****... :   ******          ****     ** **   *.**

AT3G46640.1     KKQKTSNGDGDDGGGVDPDSAMAAEEGDSG--TEDLSGKT-LKRPRLVWTPQLHKRFVDV
gm030852_Glyma1 RKQRKI-----DCG--------AAEEADSAVQTETSAERTAVKRPRLVWTPQLHKRFVDV
                :**:.      * *        ****.**.  **  : :* :******************

AT3G46640.1     VAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLTNEGPSASDKLFSST
gm030852_Glyma1 VAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSASDQLFAST
                *********************************************:********:**:**

AT3G46640.1     PVPPQSFQDI----------GGGGGSS-----------GNVGVPIPGAYGTQQMMQMPV-
gm030852_Glyma1 PV-PQSLHDSAPPSNHSNGHGHGHGHSNGRGHGHGHGHGHLSVPMMSMPYPPPLMSMPYP
                ** ***::*           * * * *           *::.**: .   .  :*.**  

AT3G46640.1     ------YAH-HMGM--------QGYHHQNHNHDPYHQNHRHHHGAGGNGAFESNPYMMQQ
gm030852_Glyma1 PPMMSGMPHGHMGIPMPNSSATSAYH-------PYNMLHQRDW-----------PHLAPN
                       .* ***:        ..**       **:  *::.            *::  :

AT3G46640.1     NKFGSMASYPSVGGGSANEN
gm030852_Glyma1 DK------------------
                :*
BoxShade v3.31 C (beta, 970507) Output
AT3G46640.1     M G E E V Q M S D Y D V S G D G D R V S E W E M G L P S D E D L A S L S Y S L I P P N L A M A F S I T P E R S R T I Q D
gm030852_Glyma1    M G E E V K T S E Y - - - - D E E R V M E W E A G L P T A N D L T P L S Q P L I P P E L A S A F S I L P E P H R T L L D
 
AT3G46640.1     V N R A S E T T L S S L R G G S S G P N T - - S S S N N N - - - - - - - - - - V E E E - - - - - D R V G S S S P G S D S
gm030852_Glyma1    V N R A S R N T L S T L R G G G G S V H Q A F S S S N N N H N Y D G D G D G G V E E E E D D D D D R D G S - - - G P D S
 
AT3G46640.1     K K Q K T S N G D G D D G G G V D P D S A M A A E E G D S G - - T E D L S G K T - L K R P R L V W T P Q L H K R F V D V
gm030852_Glyma1    R K Q R K I - - - - - D C G - - - - - - - - A A E E A D S A V Q T E T S A E R T A V K R P R L V W T P Q L H K R F V D V
 
AT3G46640.1     V A H L G I K N A V P K T I M Q L M N V E G L T R E N V A S H L Q K Y R L Y L K R M Q G L T N E G P S A S D K L F S S T
gm030852_Glyma1    V A H L G I K N A V P K T I M Q L M N V E G L T R E N V A S H L Q K Y R L Y L K R M Q G L S N E G P S A S D Q L F A S T
 
AT3G46640.1     P V P P Q S F Q D I - - - - - - - - - - G G G G G S S - - - - - - - - - - - G N V G V P I P G A Y G T Q Q M M Q M P V -
gm030852_Glyma1    P V - P Q S L H D S A P P S N H S N G H G H G H G H S N G R G H G H G H G H G H L S V P M M S M P Y P P P L M S M P Y P
 
AT3G46640.1     - - - - - - Y A H - H M G M - - - - - - - - Q G Y H H Q N H N H D P Y H Q N H R H H H G A G G N G A F E S N P Y M M Q Q
gm030852_Glyma1    P P M M S G M P H G H M G I P M P N S S A T S A Y H - - - - - - - P Y N M L H Q R D W - - - - - - - - - - - P H L A P N
 
AT3G46640.1     N K F G S M A S Y P S V G G G S A N E N
gm030852_Glyma1    D K - - - - - - - - - - - - - - - - - -
 
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