fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G46640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030851 not found in 323aa AT3G46640.2 not_not 0.444668008 III
Gm032903 not found in 306aa AT3G46640.2 not_not 0.440643863 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G46640.1     MGEEVQMSDYDVSGDGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQD
gm032903_Glyma1 MGEEVKTSEY----DEERVMEWEMGLPTANDLTPLSQPLIPPELASAFSISPEPHRTLLE
gm030851_Glyma1 MGEEVKTSEY----DEERVMEWEAGLPTANDLTPLSQPLIPPELASAFSILPEPHRTLLD
                *****: *:*    * :** *** ***: :**:.** .****:** **** **  **: :

AT3G46640.1     VNRASETTLSSLR--GGSSGPNTSS-SNNN-----------VEEE----DRVGSSSPGSD
gm032903_Glyma1 VNRASRNTLSTIR-GGGSVHQAFSSNNNNNHHYDGDGDGG-DEEEYDDADRDGS---GSD
gm030851_Glyma1 VNRASRNTLSTLRGGGGSVHQAFSS-SNNNHNYDGDGDGGVEEEEDDDDDRDGS---GPD
                *****..***::*  ***     ** .***            ***    ** **   *.*

AT3G46640.1     SKKQKTSNGDGDDGGGVDPDSAMAAEEGDSG--TEDLSGKT-LKRPRLVWTPQLHKRFVD
gm032903_Glyma1 SRKQRKI-----DCG--------VAEEADSAVRTETSAERTAVKRPRLVWTPQLHKRFVD
gm030851_Glyma1 SRKQRKI-----DCG--------AAEEADSAVQTETSAERTAVKRPRLVWTPQLHKRFVD
                *:**:.      * *        .***.**.  **  : :* :*****************

AT3G46640.1     VVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLTNEGPSASDKLFSS
gm032903_Glyma1 VVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLFAS
gm030851_Glyma1 VVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSASDQLFAS
                **********************************************:*****:**:**:*

AT3G46640.1     TPVPPQSFQD----------IGGGGGSS---------GNVGVPIPGAYGTQQMMQMPVYA
gm032903_Glyma1 TAV-PQSLHDSAPPSAHSN------------------GHGHLPVP-------MMSMPYPP
gm030851_Glyma1 TPV-PQSLHDSAPPSNHSNGHGHGHGHSNGRGHGHGHGHGHLSVP-------MMSMPYPP
                *.* ***::*                           *:  :.:*       **.**  .

AT3G46640.1     HHMGMQGYHHQNHNHDPY----HQNHRHHHGAGG----NGAFES--NPY-MMQQNKFGSM
gm032903_Glyma1 PMMSM-----------PYPPPMMSGMPHAHGHMGIPMPNSSATSAYHPYNMLHQRDWPHL
gm030851_Glyma1 PLMSM-----------PYPPPMMSGMP--HGHMGIPMPNSSATSAYHPYNMLHQRDWPHL
                  *.*           **     ..    **  *    *.:  *  :** *::*..:  :

AT3G46640.1     ASYPSVGGGSANEN
gm032903_Glyma1 AP---------NDK
gm030851_Glyma1 AP---------NDK
                *.         *::
BoxShade v3.31 C (beta, 970507) Output
AT3G46640.1     M G E E V Q M S D Y D V S G D G D R V S E W E M G L P S D E D L A S L S Y S L I P P N L A M A F S I T P E R S R T I Q D
gm032903_Glyma1    M G E E V K T S E Y - - - - D E E R V M E W E M G L P T A N D L T P L S Q P L I P P E L A S A F S I S P E P H R T L L E
gm030851_Glyma1    M G E E V K T S E Y - - - - D E E R V M E W E A G L P T A N D L T P L S Q P L I P P E L A S A F S I L P E P H R T L L D
 
AT3G46640.1     V N R A S E T T L S S L R - - G G S S G P N T S S - S N N N - - - - - - - - - - - V E E E - - - - D R V G S S S P G S D
gm032903_Glyma1    V N R A S R N T L S T I R - G G G S V H Q A F S S N N N N N H H Y D G D G D G G - D E E E Y D D A D R D G S - - - G S D
gm030851_Glyma1    V N R A S R N T L S T L R G G G G S V H Q A F S S - S N N N H N Y D G D G D G G V E E E E D D D D D R D G S - - - G P D
 
AT3G46640.1     S K K Q K T S N G D G D D G G G V D P D S A M A A E E G D S G - - T E D L S G K T - L K R P R L V W T P Q L H K R F V D
gm032903_Glyma1    S R K Q R K I - - - - - D C G - - - - - - - - V A E E A D S A V R T E T S A E R T A V K R P R L V W T P Q L H K R F V D
gm030851_Glyma1    S R K Q R K I - - - - - D C G - - - - - - - - A A E E A D S A V Q T E T S A E R T A V K R P R L V W T P Q L H K R F V D
 
AT3G46640.1     V V A H L G I K N A V P K T I M Q L M N V E G L T R E N V A S H L Q K Y R L Y L K R M Q G L T N E G P S A S D K L F S S
gm032903_Glyma1    V V A H L G I K N A V P K T I M Q L M N V E G L T R E N V A S H L Q K Y R L Y L K R M Q G L S N E G P S S S D Q L F A S
gm030851_Glyma1    V V A H L G I K N A V P K T I M Q L M N V E G L T R E N V A S H L Q K Y R L Y L K R M Q G L S N E G P S A S D Q L F A S
 
AT3G46640.1     T P V P P Q S F Q D - - - - - - - - - - I G G G G G S S - - - - - - - - - G N V G V P I P G A Y G T Q Q M M Q M P V Y A
gm032903_Glyma1    T A V - P Q S L H D S A P P S A H S N - - - - - - - - - - - - - - - - - - G H G H L P V P - - - - - - - M M S M P Y P P
gm030851_Glyma1    T P V - P Q S L H D S A P P S N H S N G H G H G H G H S N G R G H G H G H G H G H L S V P - - - - - - - M M S M P Y P P
 
AT3G46640.1     H H M G M Q G Y H H Q N H N H D P Y - - - - H Q N H R H H H G A G G - - - - N G A F E S - - N P Y - M M Q Q N K F G S M
gm032903_Glyma1    P M M S M - - - - - - - - - - - P Y P P P M M S G M P H A H G H M G I P M P N S S A T S A Y H P Y N M L H Q R D W P H L
gm030851_Glyma1    P L M S M - - - - - - - - - - - P Y P P P M M S G M P - - H G H M G I P M P N S S A T S A Y H P Y N M L H Q R D W P H L
 
AT3G46640.1     A S Y P S V G G G S A N E N
gm032903_Glyma1    A P - - - - - - - - - N D K
gm030851_Glyma1    A P - - - - - - - - - N D K
 
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