fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G47600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt003833 not found in 322aa AT3G47600.1 1st_1st 0.502340093 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G47600.1     MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRSVPTHTGLRRCSKSCRLRWTNY
pt003833_POPTR_ MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTSTGLLRCSKSCRLRWTNY
                **************************************:*** *** *************

AT3G47600.1     LRPGIKRGNFTEHEEKMILHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKKKLKKMN
pt003833_POPTR_ LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNFWNTHLKKKLRKLQ
                ***********:******:******************:********:*********:*::

AT3G47600.1     DSCDSTINNGLDNKDFSISNKNTTSHQSSNSSKGQWERRLQTDINMAKQALCDALSIDKP
pt003833_POPTR_ AGQEGQSRDGL------------SSTGSQQISRGQWERRLQTDINMARQALCEALSPGKP
                 . :.  .:**            :*  *.: *:**************:****:*** .**

AT3G47600.1     QNPTNFSIPDLGYGPSSSSSSTTTTTTTTRNTNPYPSGVYASSAENIARLLQNFMKDTPK
pt003833_POPTR_ SSLLTGLKPSCGY------------------EKPATEPIYASSTENISRLLKGWMISGPK
                ..  .   *. **                   :* .. :****:***:***:.:* . **

AT3G47600.1     TSVPLPVAATEMAITTAASS------PSTTEGDGEGIDH---SLFSFNSIDEA-------
pt003833_POPTR_ QSLKNSTTQNSFIDTAGADSLSSEGTPDKADKNGTGLSQAFESLFGFDSFDSSNSDFSQS
                 *:  ..: ..:  *:.*.*      *..:: :* *:.:   ***.*:*:*.:       

AT3G47600.1     ----------EEKPKLIDHDINGLITQGSLSLFEKWLFDE---QSHDMIINNMSLEGQEV
pt003833_POPTR_ MSPDTGLFQDESKPN--------SSAQVPLSLIERWLFDEGAMQGKDY-INEVTID-EDN
                          *.**:          :* .***:*:*****   *.:*  **::::: :: 

AT3G47600.1     LF
pt003833_POPTR_ LF
                **
BoxShade v3.31 C (beta, 970507) Output
AT3G47600.1     M G R P P C C D K I G V K K G P W T P E E D I I L V S Y I Q E H G P G N W R S V P T H T G L R R C S K S C R L R W T N Y
pt003833_POPTR_    M G R P P C C D K I G V K K G P W T P E E D I I L V S Y I Q E H G P G N W R A V P T S T G L L R C S K S C R L R W T N Y
 
AT3G47600.1     L R P G I K R G N F T E H E E K M I L H L Q A L L G N R W A A I A S Y L P E R T D N D I K N Y W N T H L K K K L K K M N
pt003833_POPTR_    L R P G I K R G N F T D H E E K M I I H L Q A L L G N R W A A I A S Y L P Q R T D N D I K N F W N T H L K K K L R K L Q
 
AT3G47600.1     D S C D S T I N N G L D N K D F S I S N K N T T S H Q S S N S S K G Q W E R R L Q T D I N M A K Q A L C D A L S I D K P
pt003833_POPTR_    A G Q E G Q S R D G L - - - - - - - - - - - - S S T G S Q Q I S R G Q W E R R L Q T D I N M A R Q A L C E A L S P G K P
 
AT3G47600.1     Q N P T N F S I P D L G Y G P S S S S S S T T T T T T T T R N T N P Y P S G V Y A S S A E N I A R L L Q N F M K D T P K
pt003833_POPTR_    S S L L T G L K P S C G Y - - - - - - - - - - - - - - - - - - E K P A T E P I Y A S S T E N I S R L L K G W M I S G P K
 
AT3G47600.1     T S V P L P V A A T E M A I T T A A S S - - - - - - P S T T E G D G E G I D H - - - S L F S F N S I D E A - - - - - - -
pt003833_POPTR_    Q S L K N S T T Q N S F I D T A G A D S L S S E G T P D K A D K N G T G L S Q A F E S L F G F D S F D S S N S D F S Q S
 
AT3G47600.1     - - - - - - - - - - E E K P K L I D H D I N G L I T Q G S L S L F E K W L F D E - - - Q S H D M I I N N M S L E G Q E V
pt003833_POPTR_    M S P D T G L F Q D E S K P N - - - - - - - - S S A Q V P L S L I E R W L F D E G A M Q G K D Y - I N E V T I D - E D N
 
AT3G47600.1     L F
pt003833_POPTR_    L F
 
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