fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G47600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb015859 not found in 304aa AT3G28910.1 1st_not 0.436817472 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G47600.1     MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRSVPTHTGLRRCSKSCRLRWTNY
Sb015859_Sorbi1 MGRPPCCEKGGVKKGPWTPEEDLVLVSYVQDHGPGNWRAVPTSTGLMRCSKSCRLRWTNY
                *******:* ************::****:*:*******:*** *** *************

AT3G47600.1     LRPGIKRGNFTEHEEKMILHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKKKLKKMN
Sb015859_Sorbi1 LRPGIKRGNFSDQEEKLIIHLQALLGNRWAAIASYMPERTDNDIKNYWNTHLKKKFTKTG
                **********:::***:*:****************:*******************:.* .

AT3G47600.1     DSCDSTINNGLDNKDFSISNKNTTSHQSSNSSKGQWERRLQTDINMAKQALCDALSID--
Sb015859_Sorbi1 GGGGAEAKSG-----------------RCAAPKGQWERRLQTDIHTARQALREALSLDPD
                .. .:  :.*                  . :.************: *:*** :***:*  

AT3G47600.1     ------KPQNPTNFSIPDLGYGPSSSSSSTTTTTTTTRNTNPYPSGVYASSAENIARLLQ
Sb015859_Sorbi1 PVPPSAKPEQ-----VPQQPPAPAATQAAGQAT--------------YASSAENIARLLE
                      **::     :*:   .*:::.::  :*              ************:

AT3G47600.1     NFMKDTPKTSVPLPVAATEMAITTAASSPSTTEGDGEGIDHSLFSFNSIDEAEEKPKLID
Sb015859_Sorbi1 GWMHPGGGSGAAGKVSSGS---RSSASSVSAFSGD-EGASAS--NSGTAVRMPERPTRTS
                .:*:    :...  *:: .    ::*** *: .** ** . *  . .:  .  *:*.  .

AT3G47600.1     HDINGLITQG---SLSLFEKWLFDEQ-SH-DMIINNMSLEGQEVLF-
Sb015859_Sorbi1 KAVDDAGTAGPGPSFSMLESWLLDDGVGHGDTGLVSVPL-GDPCEFF
                : ::.  * *   *:*::*.**:*:  .* *  : .:.* *:   *
BoxShade v3.31 C (beta, 970507) Output
AT3G47600.1     M G R P P C C D K I G V K K G P W T P E E D I I L V S Y I Q E H G P G N W R S V P T H T G L R R C S K S C R L R W T N Y
Sb015859_Sorbi1    M G R P P C C E K G G V K K G P W T P E E D L V L V S Y V Q D H G P G N W R A V P T S T G L M R C S K S C R L R W T N Y
 
AT3G47600.1     L R P G I K R G N F T E H E E K M I L H L Q A L L G N R W A A I A S Y L P E R T D N D I K N Y W N T H L K K K L K K M N
Sb015859_Sorbi1    L R P G I K R G N F S D Q E E K L I I H L Q A L L G N R W A A I A S Y M P E R T D N D I K N Y W N T H L K K K F T K T G
 
AT3G47600.1     D S C D S T I N N G L D N K D F S I S N K N T T S H Q S S N S S K G Q W E R R L Q T D I N M A K Q A L C D A L S I D - -
Sb015859_Sorbi1    G G G G A E A K S G - - - - - - - - - - - - - - - - - R C A A P K G Q W E R R L Q T D I H T A R Q A L R E A L S L D P D
 
AT3G47600.1     - - - - - - K P Q N P T N F S I P D L G Y G P S S S S S S T T T T T T T T R N T N P Y P S G V Y A S S A E N I A R L L Q
Sb015859_Sorbi1    P V P P S A K P E Q - - - - - V P Q Q P P A P A A T Q A A G Q A T - - - - - - - - - - - - - - Y A S S A E N I A R L L E
 
AT3G47600.1     N F M K D T P K T S V P L P V A A T E M A I T T A A S S P S T T E G D G E G I D H S L F S F N S I D E A E E K P K L I D
Sb015859_Sorbi1    G W M H P G G G S G A A G K V S S G S - - - R S S A S S V S A F S G D - E G A S A S - - N S G T A V R M P E R P T R T S
 
AT3G47600.1     H D I N G L I T Q G - - - S L S L F E K W L F D E Q - S H - D M I I N N M S L E G Q E V L F -
Sb015859_Sorbi1    K A V D D A G T A G P G P S F S M L E S W L L D D G V G H G D T G L V S V P L - G D P C E F F
 
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