fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G47600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm010026 not found in 320aa AT3G47600.1 1st_1st 0.514820592 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G47600.1     MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRSVPTHTGLRRCSKSCRLRWTNY
gm010026_Glyma0 MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLMRCSKSCRLRWTNY
                ***********:******************************:*** *************

AT3G47600.1     LRPGIKRGNFTEHEEKMILHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKKKLKKMN
gm010026_Glyma0 LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKMQ
                ***********:******:******************:*********************:

AT3G47600.1     DSCDSTINNGLDNKDFSISNKNTTSHQSSNSS-KGQWERRLQTDINMAKQALCDALSIDK
gm010026_Glyma0 SGGDDDDNN--DDK-----------LNSCNSQIKGQWERRLQTDIHMAKQALCEALSLDK
                .. *.  **  *:*            :*.**. ************:*******:***:**

AT3G47600.1     PQNPTNFSIPDLGYGPSSSSSSTTTTTTTTRNTNPYPSGVYASSAENIARLLQNFMKDTP
gm010026_Glyma0 PTQ----IFPETKL-PSTSSHNPTTT--------PNQTSLYASSTENIAKLLENWMKKSP
                * :     :*:    **:** ..***        *  :.:****:****:**:*:**.:*

AT3G47600.1     KTSV---PLPVAATEMAITTAASSPSTTEGDGEGIDH---SLFSFNS---------IDEA
gm010026_Glyma0 NITTITETKPFNINNMVATGSSSSEGTQSTITCTQDHALDSLWSFNSERSCQSEENTNLG
                : :.   . *.  .:*. * ::** .* .      **   **:****          : .

AT3G47600.1     EEKPKLIDHDINGLITQGSLSLFEKWLFDEQS----HDMIINNMSLE---GQEVLF
gm010026_Glyma0 ESKPQYQE-------AQVPLMLLENWLLDDAAPQCNEDLM--NMSLEENVGTKSM-
                *.**:  :       :* .* *:*:**:*: :    .*::  *****   * : :
BoxShade v3.31 C (beta, 970507) Output
AT3G47600.1     M G R P P C C D K I G V K K G P W T P E E D I I L V S Y I Q E H G P G N W R S V P T H T G L R R C S K S C R L R W T N Y
gm010026_Glyma0    M G R P P C C D K I G I K K G P W T P E E D I I L V S Y I Q E H G P G N W R S V P T N T G L M R C S K S C R L R W T N Y
 
AT3G47600.1     L R P G I K R G N F T E H E E K M I L H L Q A L L G N R W A A I A S Y L P E R T D N D I K N Y W N T H L K K K L K K M N
gm010026_Glyma0    L R P G I K R G N F T D H E E K M I I H L Q A L L G N R W A A I A S Y L P Q R T D N D I K N Y W N T H L K K K L K K M Q
 
AT3G47600.1     D S C D S T I N N G L D N K D F S I S N K N T T S H Q S S N S S - K G Q W E R R L Q T D I N M A K Q A L C D A L S I D K
gm010026_Glyma0    S G G D D D D N N - - D D K - - - - - - - - - - - L N S C N S Q I K G Q W E R R L Q T D I H M A K Q A L C E A L S L D K
 
AT3G47600.1     P Q N P T N F S I P D L G Y G P S S S S S S T T T T T T T T R N T N P Y P S G V Y A S S A E N I A R L L Q N F M K D T P
gm010026_Glyma0    P T Q - - - - I F P E T K L - P S T S S H N P T T T - - - - - - - - P N Q T S L Y A S S T E N I A K L L E N W M K K S P
 
AT3G47600.1     K T S V - - - P L P V A A T E M A I T T A A S S P S T T E G D G E G I D H - - - S L F S F N S - - - - - - - - - I D E A
gm010026_Glyma0    N I T T I T E T K P F N I N N M V A T G S S S S E G T Q S T I T C T Q D H A L D S L W S F N S E R S C Q S E E N T N L G
 
AT3G47600.1     E E K P K L I D H D I N G L I T Q G S L S L F E K W L F D E Q S - - - - H D M I I N N M S L E - - - G Q E V L F
gm010026_Glyma0    E S K P Q Y Q E - - - - - - - A Q V P L M L L E N W L L D D A A P Q C N E D L M - - N M S L E E N V G T K S M -
 
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