Input
| Putative repression domain
|
|
AT3G47640.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt026880 |
not found in 241aa |
AT3G47640.1 |
not_1st |
0.417410714 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT3G47640.1 MVSKTPSTSSDEANATADERC---------RKGKVPKRINKAVRERLKREHLNELFIELA
pt026880_POPTR_ ------MSTGSEPDVTVEEVTGNRSFPAGKNKGKVPRRIHKAEREKLKREQLNELFLDLA
::..*.:.*.:* .*****:**:** **:****:*****::**
AT3G47640.1 DTLELNQQNSGKASILCEATRFLKDVFGQIESLRKEHASLLSESSYVTTEKNELKEETSV
pt026880_POPTR_ SALELSEPNTGKASILCETTRLLKDLLTQIESLKKDNVALLSESRYVTVEKNELREENSV
.:***.: *:********:**:***:: *****:*::.:***** ***.*****:**.**
AT3G47640.1 LETEISKLQNEIEAR-ANQSKPDLNTSPAPEYHHHHYQQQHPERVSQFPGLPIFQGPGFQ
pt026880_POPTR_ LENQIGKLQGELESRVAAQSTPVLNVPP-PEF------QQPP----HFPG-DSFRLPAVD
**.:*.***.*:*:* * **.* **..* **: ** * :*** *: *..:
AT3G47640.1 QSATTLHPPATVLVLPIQPDPQTQDISEMTQAQQPLMFNSSNVSKPCPRYASAADSWSSR
pt026880_POPTR_ AAAAALQQTPAVFVVPIRPD-----------HVQGLPMATSNVRKPHARYPTAADSWPSQ
:*::*: ..:*:*:**:** * * : :*** ** .**.:*****.*:
AT3G47640.1 LLGERLKASE--------------------
pt026880_POPTR_ LLGEQQIARKEVQFSGKDSAICNPGERCHP
****: * :
BoxShade v3.31 C (beta, 970507) Output
AT3G47640.1 |
M |
V |
S |
K |
T |
P |
S |
T |
S |
S |
D |
E |
A |
N |
A |
T |
A |
D |
E |
R |
C |
- |
- |
- |
- |
- |
- |
- |
- |
- |
R |
K |
G |
K |
V |
P |
K |
R |
I |
N |
K |
A |
V |
R |
E |
R |
L |
K |
R |
E |
H |
L |
N |
E |
L |
F |
I |
E |
L |
A |
pt026880_POPTR_ |
- |
- |
- |
- |
- |
- |
M |
S |
T |
G |
S |
E |
P |
D |
V |
T |
V |
E |
E |
V |
T |
G |
N |
R |
S |
F |
P |
A |
G |
K |
N |
K |
G |
K |
V |
P |
R |
R |
I |
H |
K |
A |
E |
R |
E |
K |
L |
K |
R |
E |
Q |
L |
N |
E |
L |
F |
L |
D |
L |
A |
|
AT3G47640.1 |
D |
T |
L |
E |
L |
N |
Q |
Q |
N |
S |
G |
K |
A |
S |
I |
L |
C |
E |
A |
T |
R |
F |
L |
K |
D |
V |
F |
G |
Q |
I |
E |
S |
L |
R |
K |
E |
H |
A |
S |
L |
L |
S |
E |
S |
S |
Y |
V |
T |
T |
E |
K |
N |
E |
L |
K |
E |
E |
T |
S |
V |
pt026880_POPTR_ |
S |
A |
L |
E |
L |
S |
E |
P |
N |
T |
G |
K |
A |
S |
I |
L |
C |
E |
T |
T |
R |
L |
L |
K |
D |
L |
L |
T |
Q |
I |
E |
S |
L |
K |
K |
D |
N |
V |
A |
L |
L |
S |
E |
S |
R |
Y |
V |
T |
V |
E |
K |
N |
E |
L |
R |
E |
E |
N |
S |
V |
|
AT3G47640.1 |
L |
E |
T |
E |
I |
S |
K |
L |
Q |
N |
E |
I |
E |
A |
R |
- |
A |
N |
Q |
S |
K |
P |
D |
L |
N |
T |
S |
P |
A |
P |
E |
Y |
H |
H |
H |
H |
Y |
Q |
Q |
Q |
H |
P |
E |
R |
V |
S |
Q |
F |
P |
G |
L |
P |
I |
F |
Q |
G |
P |
G |
F |
Q |
pt026880_POPTR_ |
L |
E |
N |
Q |
I |
G |
K |
L |
Q |
G |
E |
L |
E |
S |
R |
V |
A |
A |
Q |
S |
T |
P |
V |
L |
N |
V |
P |
P |
- |
P |
E |
F |
- |
- |
- |
- |
- |
- |
Q |
Q |
P |
P |
- |
- |
- |
- |
H |
F |
P |
G |
- |
D |
S |
F |
R |
L |
P |
A |
V |
D |
|
AT3G47640.1 |
Q |
S |
A |
T |
T |
L |
H |
P |
P |
A |
T |
V |
L |
V |
L |
P |
I |
Q |
P |
D |
P |
Q |
T |
Q |
D |
I |
S |
E |
M |
T |
Q |
A |
Q |
Q |
P |
L |
M |
F |
N |
S |
S |
N |
V |
S |
K |
P |
C |
P |
R |
Y |
A |
S |
A |
A |
D |
S |
W |
S |
S |
R |
pt026880_POPTR_ |
A |
A |
A |
A |
A |
L |
Q |
Q |
T |
P |
A |
V |
F |
V |
V |
P |
I |
R |
P |
D |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
H |
V |
Q |
G |
L |
P |
M |
A |
T |
S |
N |
V |
R |
K |
P |
H |
A |
R |
Y |
P |
T |
A |
A |
D |
S |
W |
P |
S |
Q |
|
AT3G47640.1 |
L |
L |
G |
E |
R |
L |
K |
A |
S |
E |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt026880_POPTR_ |
L |
L |
G |
E |
Q |
Q |
I |
A |
R |
K |
E |
V |
Q |
F |
S |
G |
K |
D |
S |
A |
I |
C |
N |
P |
G |
E |
R |
C |
H |
P |
|
|