fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G47640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm011055 not found in 222aa AT3G47640.1 1st_1st 0.408482142 Ia
Pt011769 not found in 221aa AT3G47640.1 1st_1st 0.417410714 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G47640.1     --MVSKTPSTSSDEANATADERC-----RKGKVPKRINKAVRERLKREHLNELFIELADT
pt011769_POPTR_ MSMGSELNETVED----VTENRCFPAGENKGKVPKRIHKSEREKLKREQLNELFLELASA
gm011055_Glyma0 --MGSESVAPMVE----TSKNRSSSGKMNQGKVPRKIHKAEREKMKREHLNERFVDLASA
                  * *:   .  :    .:.:*.     .:****::*:*: **::***:*** *::**.:

AT3G47640.1     LELNQQNSGKASILCEATRFLKDVFGQIESLRKEHASLLSESSYVTTEKNELKEETSVLE
pt011769_POPTR_ LELSQPNNGKASMLCETTRLLKDLHTQIESLKKENVALLSESHYVTVEKNELREESSALE
gm011055_Glyma0 LDLNE-NNGKASILCETARLLKDLLSQIESLKKENVTLLSESHYMTMEKNELKEENCSLE
                *:*.: *.****:***::*:***:  *****:**:.:***** *:* *****:**.. **

AT3G47640.1     TEISKLQNEIEARAN-QSKPDLNTSPAPEYHHHHYQQQHPERVSQFPG----LPIFQGPG
pt011769_POPTR_ HQIGKLHSELEMRAASQSKPDLNVPP-----PEFLQPPH------FPVDSFRLPAVDAVA
gm011055_Glyma0 TQIEKLQGEIQARLA-QSKPDLNVPP-----HEPPEQTN------FPGQNLQLHTIEP-N
                 :* **:.*:: *   *******..*      .  :  :      **     *  .:   

AT3G47640.1     FQQSATTLHPPATVLVLPIQPDPQTQ----DISEMTQAQQPLMFNSSNVSKPCPRYASAA
pt011769_POPTR_ LQQT-------STVFVVPISPDHVQGFPM---------------ATSNVSKPHPRYPTAA
gm011055_Glyma0 LQQG-------STVLVVPFHPNLQASFPAPNVTEVTP------KSMSVVSKPHARYPTPA
                :**        :**:*:*: *:                        * **** .**.:.*

AT3G47640.1     DSWSSRLLGERLKASE--
pt011769_POPTR_ DSWPSQLLREQQIGRKEV
gm011055_Glyma0 DSWPSQLLGEQPTSS---
                ***.*:** *:  .
BoxShade v3.31 C (beta, 970507) Output
AT3G47640.1     - - M V S K T P S T S S D E A N A T A D E R C - - - - - R K G K V P K R I N K A V R E R L K R E H L N E L F I E L A D T
pt011769_POPTR_    M S M G S E L N E T V E D - - - - V T E N R C F P A G E N K G K V P K R I H K S E R E K L K R E Q L N E L F L E L A S A
gm011055_Glyma0    - - M G S E S V A P M V E - - - - T S K N R S S S G K M N Q G K V P R K I H K A E R E K M K R E H L N E R F V D L A S A
 
AT3G47640.1     L E L N Q Q N S G K A S I L C E A T R F L K D V F G Q I E S L R K E H A S L L S E S S Y V T T E K N E L K E E T S V L E
pt011769_POPTR_    L E L S Q P N N G K A S M L C E T T R L L K D L H T Q I E S L K K E N V A L L S E S H Y V T V E K N E L R E E S S A L E
gm011055_Glyma0    L D L N E - N N G K A S I L C E T A R L L K D L L S Q I E S L K K E N V T L L S E S H Y M T M E K N E L K E E N C S L E
 
AT3G47640.1     T E I S K L Q N E I E A R A N - Q S K P D L N T S P A P E Y H H H H Y Q Q Q H P E R V S Q F P G - - - - L P I F Q G P G
pt011769_POPTR_    H Q I G K L H S E L E M R A A S Q S K P D L N V P P - - - - - P E F L Q P P H - - - - - - F P V D S F R L P A V D A V A
gm011055_Glyma0    T Q I E K L Q G E I Q A R L A - Q S K P D L N V P P - - - - - H E P P E Q T N - - - - - - F P G Q N L Q L H T I E P - N
 
AT3G47640.1     F Q Q S A T T L H P P A T V L V L P I Q P D P Q T Q - - - - D I S E M T Q A Q Q P L M F N S S N V S K P C P R Y A S A A
pt011769_POPTR_    L Q Q T - - - - - - - S T V F V V P I S P D H V Q G F P M - - - - - - - - - - - - - - - A T S N V S K P H P R Y P T A A
gm011055_Glyma0    L Q Q G - - - - - - - S T V L V V P F H P N L Q A S F P A P N V T E V T P - - - - - - K S M S V V S K P H A R Y P T P A
 
AT3G47640.1     D S W S S R L L G E R L K A S E - -
pt011769_POPTR_    D S W P S Q L L R E Q Q I G R K E V
gm011055_Glyma0    D S W P S Q L L G E Q P T S S - - -
 
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