fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G47640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt011769 not found in 221aa AT3G47640.1 1st_1st 0.417410714 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G47640.1     --MVSKTPSTSSDEANATADERC-----RKGKVPKRINKAVRERLKREHLNELFIELADT
pt011769_POPTR_ MSMGSELNETVED----VTENRCFPAGENKGKVPKRIHKSEREKLKREQLNELFLELASA
                  * *:  .* .*    .:::**     .********:*: **:****:*****:***.:

AT3G47640.1     LELNQQNSGKASILCEATRFLKDVFGQIESLRKEHASLLSESSYVTTEKNELKEETSVLE
pt011769_POPTR_ LELSQPNNGKASMLCETTRLLKDLHTQIESLKKENVALLSESHYVTVEKNELREESSALE
                ***.* *.****:***:**:***:. *****:**:.:***** ***.*****:**:*.**

AT3G47640.1     TEISKLQNEIEAR-ANQSKPDLNTSPAPEYHHHHYQQQHPERVSQFPGLPI--FQGPGFQ
pt011769_POPTR_ HQIGKLHSELEMRAASQSKPDLNVPP-PEF-------------LQPPHFPVDSFRLPAV-
                 :*.**:.*:* * *.*******..* **:              * * :*:  *: *.. 

AT3G47640.1     QSATTLHPPATVLVLPIQPDPQTQDISEMTQAQQPLMFNSSNVSKPCPRYASAADSWSSR
pt011769_POPTR_ -DAVALQQTSTVFVVPISPD-----------HVQGFPMATSNVSKPHPRYPTAADSWPSQ
                 .*.:*: .:**:*:**.**             * : : :****** ***.:*****.*:

AT3G47640.1     LLGERLKASE--
pt011769_POPTR_ LLREQQIGRKEV
                ** *:  . :
BoxShade v3.31 C (beta, 970507) Output
AT3G47640.1     - - M V S K T P S T S S D E A N A T A D E R C - - - - - R K G K V P K R I N K A V R E R L K R E H L N E L F I E L A D T
pt011769_POPTR_    M S M G S E L N E T V E D - - - - V T E N R C F P A G E N K G K V P K R I H K S E R E K L K R E Q L N E L F L E L A S A
 
AT3G47640.1     L E L N Q Q N S G K A S I L C E A T R F L K D V F G Q I E S L R K E H A S L L S E S S Y V T T E K N E L K E E T S V L E
pt011769_POPTR_    L E L S Q P N N G K A S M L C E T T R L L K D L H T Q I E S L K K E N V A L L S E S H Y V T V E K N E L R E E S S A L E
 
AT3G47640.1     T E I S K L Q N E I E A R - A N Q S K P D L N T S P A P E Y H H H H Y Q Q Q H P E R V S Q F P G L P I - - F Q G P G F Q
pt011769_POPTR_    H Q I G K L H S E L E M R A A S Q S K P D L N V P P - P E F - - - - - - - - - - - - - L Q P P H F P V D S F R L P A V -
 
AT3G47640.1     Q S A T T L H P P A T V L V L P I Q P D P Q T Q D I S E M T Q A Q Q P L M F N S S N V S K P C P R Y A S A A D S W S S R
pt011769_POPTR_    - D A V A L Q Q T S T V F V V P I S P D - - - - - - - - - - - H V Q G F P M A T S N V S K P H P R Y P T A A D S W P S Q
 
AT3G47640.1     L L G E R L K A S E - -
pt011769_POPTR_    L L R E Q Q I G R K E V
 
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