fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G47640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt011769 not found in 221aa AT3G47640.1 1st_1st 0.417410714 Ia
Pt026880 not found in 241aa AT3G47640.1 not_1st 0.417410714 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G47640.1     MVSKTPSTSSDEANATADE----RC-----RKGKVPKRINKAVRERLKREHLNELFIELA
pt011769_POPTR_ ------MSMGSELNETVEDVTENRCFPAGENKGKVPKRIHKSEREKLKREQLNELFLELA
pt026880_POPTR_ ------MSTGSEPDVTVEEVTGNRSFPAGKNKGKVPRRIHKAEREKLKREQLNELFLDLA
                       : ..* : *.::    *.     .*****:**:*: **:****:*****::**

AT3G47640.1     DTLELNQQNSGKASILCEATRFLKDVFGQIESLRKEHASLLSESSYVTTEKNELKEETSV
pt011769_POPTR_ SALELSQPNNGKASMLCETTRLLKDLHTQIESLKKENVALLSESHYVTVEKNELREESSA
pt026880_POPTR_ SALELSEPNTGKASILCETTRLLKDLLTQIESLKKDNVALLSESRYVTVEKNELREENSV
                .:***.: *.****:***:**:***:  *****:*::.:***** ***.*****:**.*.

AT3G47640.1     LETEISKLQNEIEAR-ANQSKPDLNTSPAPEYHHHHYQQQHPERVSQFPGLPIFQGPGFQ
pt011769_POPTR_ LEHQIGKLHSELEMRAASQSKPDLNVPP-PEF------LQPP----HFPV-DSFRLPAVD
pt026880_POPTR_ LENQIGKLQGELESRVAAQSTPVLNVPP-PEF------QQPP----HFPG-DSFRLPAVD
                ** :*.**:.*:* * * **.* **..* **:       * *    :**    *: *..:

AT3G47640.1     QSATTLHPPATVLVLPIQPDPQTQDISEMTQAQQPLMFNSSNVSKPCPRYASAADSWSSR
pt011769_POPTR_ --AVALQQTSTVFVVPISPD-----------HVQGFPMATSNVSKPHPRYPTAADSWPSQ
pt026880_POPTR_ AAAAALQQTPAVFVVPIRPD-----------HVQGLPMATSNVRKPHARYPTAADSWPSQ
                  *.:*: ..:*:*:** **             * : : :*** ** .**.:*****.*:

AT3G47640.1     LLGERLKASE--------------------
pt011769_POPTR_ LLREQQIGRKEV------------------
pt026880_POPTR_ LLGEQQIARKEVQFSGKDSAICNPGERCHP
                ** *:  . :
BoxShade v3.31 C (beta, 970507) Output
AT3G47640.1     M V S K T P S T S S D E A N A T A D E - - - - R C - - - - - R K G K V P K R I N K A V R E R L K R E H L N E L F I E L A
pt011769_POPTR_    - - - - - - M S M G S E L N E T V E D V T E N R C F P A G E N K G K V P K R I H K S E R E K L K R E Q L N E L F L E L A
pt026880_POPTR_    - - - - - - M S T G S E P D V T V E E V T G N R S F P A G K N K G K V P R R I H K A E R E K L K R E Q L N E L F L D L A
 
AT3G47640.1     D T L E L N Q Q N S G K A S I L C E A T R F L K D V F G Q I E S L R K E H A S L L S E S S Y V T T E K N E L K E E T S V
pt011769_POPTR_    S A L E L S Q P N N G K A S M L C E T T R L L K D L H T Q I E S L K K E N V A L L S E S H Y V T V E K N E L R E E S S A
pt026880_POPTR_    S A L E L S E P N T G K A S I L C E T T R L L K D L L T Q I E S L K K D N V A L L S E S R Y V T V E K N E L R E E N S V
 
AT3G47640.1     L E T E I S K L Q N E I E A R - A N Q S K P D L N T S P A P E Y H H H H Y Q Q Q H P E R V S Q F P G L P I F Q G P G F Q
pt011769_POPTR_    L E H Q I G K L H S E L E M R A A S Q S K P D L N V P P - P E F - - - - - - L Q P P - - - - H F P V - D S F R L P A V D
pt026880_POPTR_    L E N Q I G K L Q G E L E S R V A A Q S T P V L N V P P - P E F - - - - - - Q Q P P - - - - H F P G - D S F R L P A V D
 
AT3G47640.1     Q S A T T L H P P A T V L V L P I Q P D P Q T Q D I S E M T Q A Q Q P L M F N S S N V S K P C P R Y A S A A D S W S S R
pt011769_POPTR_    - - A V A L Q Q T S T V F V V P I S P D - - - - - - - - - - - H V Q G F P M A T S N V S K P H P R Y P T A A D S W P S Q
pt026880_POPTR_    A A A A A L Q Q T P A V F V V P I R P D - - - - - - - - - - - H V Q G L P M A T S N V R K P H A R Y P T A A D S W P S Q
 
AT3G47640.1     L L G E R L K A S E - - - - - - - - - - - - - - - - - - - -
pt011769_POPTR_    L L R E Q Q I G R K E V - - - - - - - - - - - - - - - - - -
pt026880_POPTR_    L L G E Q Q I A R K E V Q F S G K D S A I C N P G E R C H P
 
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