fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G47640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb028823 DSLPGQLCLSLPQSSQ in 301/329 AT3G47640.1 1st_1st 0.258928571 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G47640.1     --------------------------------------------------------MVSK
Sb028823_Sorbi1 RTSSPLPQPAVVPCLLLPVLIRPPSIPPSAAASPPFPTDHQSADQDPSRLRNNILGMVAD
                                                                        **:.

AT3G47640.1     TPSTSS--DEANATADERCRKGKV--------PKRINKAVRERLKREHLNELFIELADTL
Sb028823_Sorbi1 TESADSLPGSSNA-ASETPAHGSIHQKSQENPSKKTHKAEREKLKRDQLNDLFVELGSML
                * *:.*  ..:** *.*   :*.:        .*: :** **:***::**:**:**.. *

AT3G47640.1     ELNQQNSGKASILCEATRFLKDVFGQIESLRKEHASLLSESSYVTTEKNELKEETSVLET
Sb028823_Sorbi1 DLDRQNTGKATVLGDAARVLRDLITQVESLRKEQSALVSERQYVSSEKNELEEENNSLKS
                :*::**:***::* :*:*.*:*:: *:******:::*:** .**::*****:**.. *::

AT3G47640.1     EISKLQNEIEAR-----------------ANQSKPDLNTSPAPEYHHHHYQQQHPERVSQ
Sb028823_Sorbi1 QISELQNELCTRLRNSSLNQNSLGMSLPVANTVGPDLATHPMPQ-----------QIWSN
                :**:****: :*                 **   *** * * *:           :  *:

AT3G47640.1     FPGLPIFQGPGFQQSATTLHP--PATVLVLPIQPDPQTQDISE---MTQAQQPLMFN---
Sb028823_Sorbi1 IPNL---------SSVSMAHPTNAATLL--------HSRDHSADAGQGYAPQPRELQLFP
                :*.*         .*.:  **  .**:*        :::* *       * **  ::   

AT3G47640.1     --SSNVSKPC-------PRYASAADSWSSRLLGERLKASE------------------
Sb028823_Sorbi1 GASSSPERGCSGLGSDQPASSSLTDSLPGQLCLSLPQSSQEGSSSGVVPRSRKEQRNG
                  **. .: *       *  :* :** ..:*  .  ::*:
BoxShade v3.31 C (beta, 970507) Output
AT3G47640.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M V S K
Sb028823_Sorbi1    R T S S P L P Q P A V V P C L L L P V L I R P P S I P P S A A A S P P F P T D H Q S A D Q D P S R L R N N I L G M V A D
 
AT3G47640.1     T P S T S S - - D E A N A T A D E R C R K G K V - - - - - - - - P K R I N K A V R E R L K R E H L N E L F I E L A D T L
Sb028823_Sorbi1    T E S A D S L P G S S N A - A S E T P A H G S I H Q K S Q E N P S K K T H K A E R E K L K R D Q L N D L F V E L G S M L
 
AT3G47640.1     E L N Q Q N S G K A S I L C E A T R F L K D V F G Q I E S L R K E H A S L L S E S S Y V T T E K N E L K E E T S V L E T
Sb028823_Sorbi1    D L D R Q N T G K A T V L G D A A R V L R D L I T Q V E S L R K E Q S A L V S E R Q Y V S S E K N E L E E E N N S L K S
 
AT3G47640.1     E I S K L Q N E I E A R - - - - - - - - - - - - - - - - - A N Q S K P D L N T S P A P E Y H H H H Y Q Q Q H P E R V S Q
Sb028823_Sorbi1    Q I S E L Q N E L C T R L R N S S L N Q N S L G M S L P V A N T V G P D L A T H P M P Q - - - - - - - - - - - Q I W S N
 
AT3G47640.1     F P G L P I F Q G P G F Q Q S A T T L H P - - P A T V L V L P I Q P D P Q T Q D I S E - - - M T Q A Q Q P L M F N - - -
Sb028823_Sorbi1    I P N L - - - - - - - - - S S V S M A H P T N A A T L L - - - - - - - - H S R D H S A D A G Q G Y A P Q P R E L Q L F P
 
AT3G47640.1     - - S S N V S K P C - - - - - - - P R Y A S A A D S W S S R L L G E R L K A S E - - - - - - - - - - - - - - - - - -
Sb028823_Sorbi1    G A S S S P E R G C S G L G S D Q P A S S S L T D S L P G Q L C L S L P Q S S Q E G S S S G V V P R S R K E Q R N G
 
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