fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G47710.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os011454 not found in 92aa AT1G26945.1 1st_not 0.647398843 II
Sb022206 not found in 213aa AT1G26945.1 1st_not 0.624277456 II
Gm010049 not found in 92aa AT1G74500.1 1st_not 0.710982658 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G47710.1     ----------------------------------------MSSRKSRSRQTGASM-ITDE
gm010049_Glyma0 ----------------------------------------MSSRRSRSRQTSSSRNITDD
Os011454_Os03t0 ----------------------------------------MSSRRSRSRQSGSSR-ITDE
Sb022206_Sorbi1 LPFHHLCISNLLASLLTSQFVSRSLAKLLSPISQTTTSTKMSSRRSRSRQSGSSR-ITEE
                                                        ****:*****:.:*  **::

AT3G47710.1     QINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNLSKEVDDLSERLSQLLESTD
gm010049_Glyma0 QINDLVSKLQQLLPE-IRDRRSDKVSASKVLQETCNYIRSLHREVDDLSERLSELLATTD
Os011454_Os03t0 QISDLVSKLQDLLPE-ARLRSNDRVPSSRVLQETCNYIRSLHQEVDDLSERLSELLATSD
Sb022206_Sorbi1 QISDLVSKLQDLLPE-ARLQSNARVPSARVLQETCNYIRSLHQEVDDLSERLSELLATSD
                **.*** :*: ****  . : . :*.:::******.***.* :**********:** ::*

AT3G47710.1     --SAQAALIRSLLMQ
gm010049_Glyma0 --TAQAAIIRNLLMQ
Os011454_Os03t0 MSSAQAAIIRSLLM-
Sb022206_Sorbi1 MSSAQAAVIRSLLM-
                  :****:**.***
BoxShade v3.31 C (beta, 970507) Output
AT3G47710.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R K S R S R Q T G A S M - I T D E
gm010049_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R S R S R Q T S S S R N I T D D
Os011454_Os03t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R S R S R Q S G S S R - I T D E
Sb022206_Sorbi1    L P F H H L C I S N L L A S L L T S Q F V S R S L A K L L S P I S Q T T T S T K M S S R R S R S R Q S G S S R - I T E E
 
AT3G47710.1     Q I N D L V L Q L H R L L P E L A N N R R S G K V S A S R V L Q E T C S Y I R N L S K E V D D L S E R L S Q L L E S T D
gm010049_Glyma0    Q I N D L V S K L Q Q L L P E - I R D R R S D K V S A S K V L Q E T C N Y I R S L H R E V D D L S E R L S E L L A T T D
Os011454_Os03t0    Q I S D L V S K L Q D L L P E - A R L R S N D R V P S S R V L Q E T C N Y I R S L H Q E V D D L S E R L S E L L A T S D
Sb022206_Sorbi1    Q I S D L V S K L Q D L L P E - A R L Q S N A R V P S A R V L Q E T C N Y I R S L H Q E V D D L S E R L S E L L A T S D
 
AT3G47710.1     - - S A Q A A L I R S L L M Q
gm010049_Glyma0    - - T A Q A A I I R N L L M Q
Os011454_Os03t0    M S S A Q A A I I R S L L M -
Sb022206_Sorbi1    M S S A Q A A V I R S L L M -
 
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