fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G47710.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os011458 not found in 91aa AT1G26945.1 not_not 0.508670520 III
Sb002496 not found in 86aa AT3G28857.1 not_not 0.468208092 III
Gm015729 not found in 92aa AT1G74500.1 not_not 0.699421965 III
Gm002763 not found in 93aa AT1G26945.1 not_not 0.658959537 III
Gm000625 not found in 93aa AT1G26945.1 not_not 0.653179190 III
Gm022905 not found in 93aa AT1G26945.1 not_not 0.647398843 III
Gm049258 not found in 93aa AT1G26945.1 not_not 0.612716763 III
Gm050375 not found in 92aa AT1G26945.1 not_not 0.578034682 III
Gm051002 not found in 91aa AT1G26945.1 not_not 0.578034682 III
Gm035037 not found in 91aa AT1G26945.1 not_not 0.578034682 III
Gm025833 not found in 91aa AT1G26945.1 not_not 0.578034682 III
Pt023817 not found in 91aa AT1G74500.1 not_not 0.693641618 III
Pt004762 not found in 90aa AT5G39860.1 not_not 0.595375722 III
Pt019267 not found in 90aa AT5G39860.1 not_not 0.578034682 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G47710.1     MSSRKSRSRQTGASM-ITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRN
gm022905_Glyma0 MSSRRSRSRQSGVSTEITDAQITDLISKLQQLIPEL-RARRSDKVSASKVLQETCNYIKS
gm015729_Glyma0 MSSRRSRSRQTSSSRNITDDQINDLVSKLQQLLPEI-RDRRSDKVSASKVLQETCNYIRS
gm002763_Glyma0 MSSRRSRSRQSGASAEITDAQITDLVSKLQQLIPEL-RARRSDKVSAAKVLQETCNYIKN
gm025833_Glyma0 MSSRRSR--QHSGSTRISDDQIIELVSKLRQLVPEI-RNRRSDKVSASKVLQETCNYIRS
pt019267_POPTR_ MSSRRSR--Q-SSVPRITDDQIIHLVSKLRQLLPEI-RQRRSDKVSASKVLQETCNYIKN
gm000625_Glyma0 MSSRRSRSRQSGASAEITDAQITDLVSKLQQLIPEL-RARRSDKVSSAKVLQETCNYIKN
gm051002_Glyma1 MSSRRSR--QQSASTRISDDQIIDLVSKLRQLVPEI-RDRRSDKVSASKVLQETCNYIRS
Sb002496_Sorbi1 MSS--------GRRGRISDDEINELISKLQALLPESSRRRNASRSSASKLLKETCAYIKS
gm049258_Glyma1 MSSRRSRSSQSDVSTEITDAQITDIISKLQQLIPEL-DARRSDKVSASKVLQETCNYIKS
pt004762_POPTR_ MSSRRPR--Q-SSVPRITDDQIIDLVSKLRQLLPEI-SQRRSDKVSASKVLQETCNYIRN
gm050375_Glyma1 MSSRRSR--QHSGSTRISDDQIIELVSKLRQLVPEI-RNRRSDKVSASKVLQETCNYIRG
gm035037_Glyma1 MSSRRSR--QQSASTRISDDQIIDLVSKLRQLVPEI-RDRRSDKVSASKVLQETCNYIRS
Os011458_Os03t0 MSSRRG---GGGGGGRITDEEINELISKLQALLPESSRSRGASRSSASKLLKETCSYIKS
pt023817_POPTR_ MSSRRSRSRQSSSSR-ISDDQILDLVTKLQQLLPEI-RNRRSDKVSAAKILQETCNYIKS
                ***        .    *:* :* .:: :*: *:**    * :.: *::::*:*** **:.

AT3G47710.1     LSKEVDDLSERLSQLLESTD--SAQAALIRSLLMQ
gm022905_Glyma0 LHREVDDLSDRLSQLLATTDSNSAQAAIIRSLLM-
gm015729_Glyma0 LHREVGDLSERLSELLDTTD--TAQAAIIRNLLMQ
gm002763_Glyma0 LHREVDDLSDRLSELLANTDSNSAQAAIIRSLLM-
gm025833_Glyma0 LHREVSDLSERLSQLLTTIDADSAEAGIIRSLLN-
pt019267_POPTR_ LHREVDDLSERLSQLLATIDSDSPEAEIIRSLIM-
gm000625_Glyma0 LHREVDDLSDRLSELLANTDSNSAQAAIIRSLLM-
gm051002_Glyma1 LHREVDDLSERLSQLLATIDADSPEAAIIRSLIN-
Sb002496_Sorbi1 LHREVDDLSERLSGLMSTMDNDSPQAEIIRSLLR-
gm049258_Glyma1 LHREVDDLSDRLSQLLATTDSNSAQAAIIRSLLL-
pt004762_POPTR_ LHREVDDLSERLSQLLATIDADSPEAAIIRSLIM-
gm050375_Glyma1 LHREVSDLSERLSQLLTTIDADSAEAGIIRSLLNQ
gm035037_Glyma1 LHREVDDLSERLSQLLATIDADSPEAAIIRSLIN-
Os011458_Os03t0 LHREVDDLSDRLSELMSTMDNNSPQAEIIRSLLR-
pt023817_POPTR_ LHREVGDLSERLSELLETTD--TAQAAIIRNLLMQ
                * :**.***:*** *: . *  :.:* :**.*:
BoxShade v3.31 C (beta, 970507) Output
AT3G47710.1     M S S R K S R S R Q T G A S M - I T D E Q I N D L V L Q L H R L L P E L A N N R R S G K V S A S R V L Q E T C S Y I R N
gm022905_Glyma0    M S S R R S R S R Q S G V S T E I T D A Q I T D L I S K L Q Q L I P E L - R A R R S D K V S A S K V L Q E T C N Y I K S
gm015729_Glyma0    M S S R R S R S R Q T S S S R N I T D D Q I N D L V S K L Q Q L L P E I - R D R R S D K V S A S K V L Q E T C N Y I R S
gm002763_Glyma0    M S S R R S R S R Q S G A S A E I T D A Q I T D L V S K L Q Q L I P E L - R A R R S D K V S A A K V L Q E T C N Y I K N
gm025833_Glyma0    M S S R R S R - - Q H S G S T R I S D D Q I I E L V S K L R Q L V P E I - R N R R S D K V S A S K V L Q E T C N Y I R S
pt019267_POPTR_    M S S R R S R - - Q - S S V P R I T D D Q I I H L V S K L R Q L L P E I - R Q R R S D K V S A S K V L Q E T C N Y I K N
gm000625_Glyma0    M S S R R S R S R Q S G A S A E I T D A Q I T D L V S K L Q Q L I P E L - R A R R S D K V S S A K V L Q E T C N Y I K N
gm051002_Glyma1    M S S R R S R - - Q Q S A S T R I S D D Q I I D L V S K L R Q L V P E I - R D R R S D K V S A S K V L Q E T C N Y I R S
Sb002496_Sorbi1    M S S - - - - - - - - G R R G R I S D D E I N E L I S K L Q A L L P E S S R R R N A S R S S A S K L L K E T C A Y I K S
gm049258_Glyma1    M S S R R S R S S Q S D V S T E I T D A Q I T D I I S K L Q Q L I P E L - D A R R S D K V S A S K V L Q E T C N Y I K S
pt004762_POPTR_    M S S R R P R - - Q - S S V P R I T D D Q I I D L V S K L R Q L L P E I - S Q R R S D K V S A S K V L Q E T C N Y I R N
gm050375_Glyma1    M S S R R S R - - Q H S G S T R I S D D Q I I E L V S K L R Q L V P E I - R N R R S D K V S A S K V L Q E T C N Y I R G
gm035037_Glyma1    M S S R R S R - - Q Q S A S T R I S D D Q I I D L V S K L R Q L V P E I - R D R R S D K V S A S K V L Q E T C N Y I R S
Os011458_Os03t0    M S S R R G - - - G G G G G G R I T D E E I N E L I S K L Q A L L P E S S R S R G A S R S S A S K L L K E T C S Y I K S
pt023817_POPTR_    M S S R R S R S R Q S S S S R - I S D D Q I L D L V T K L Q Q L L P E I - R N R R S D K V S A A K I L Q E T C N Y I K S
 
AT3G47710.1     L S K E V D D L S E R L S Q L L E S T D - - S A Q A A L I R S L L M Q
gm022905_Glyma0    L H R E V D D L S D R L S Q L L A T T D S N S A Q A A I I R S L L M -
gm015729_Glyma0    L H R E V G D L S E R L S E L L D T T D - - T A Q A A I I R N L L M Q
gm002763_Glyma0    L H R E V D D L S D R L S E L L A N T D S N S A Q A A I I R S L L M -
gm025833_Glyma0    L H R E V S D L S E R L S Q L L T T I D A D S A E A G I I R S L L N -
pt019267_POPTR_    L H R E V D D L S E R L S Q L L A T I D S D S P E A E I I R S L I M -
gm000625_Glyma0    L H R E V D D L S D R L S E L L A N T D S N S A Q A A I I R S L L M -
gm051002_Glyma1    L H R E V D D L S E R L S Q L L A T I D A D S P E A A I I R S L I N -
Sb002496_Sorbi1    L H R E V D D L S E R L S G L M S T M D N D S P Q A E I I R S L L R -
gm049258_Glyma1    L H R E V D D L S D R L S Q L L A T T D S N S A Q A A I I R S L L L -
pt004762_POPTR_    L H R E V D D L S E R L S Q L L A T I D A D S P E A A I I R S L I M -
gm050375_Glyma1    L H R E V S D L S E R L S Q L L T T I D A D S A E A G I I R S L L N Q
gm035037_Glyma1    L H R E V D D L S E R L S Q L L A T I D A D S P E A A I I R S L I N -
Os011458_Os03t0    L H R E V D D L S D R L S E L M S T M D N N S P Q A E I I R S L L R -
pt023817_POPTR_    L H R E V G D L S E R L S E L L E T T D - - T A Q A A I I R N L L M Q
 
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