Input
| Putative repression domain
|
|
AT3G47710.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt023817 |
not found in 91aa |
AT1G74500.1 |
not_not |
0.693641618 |
III |
Pt004762 |
not found in 90aa |
AT5G39860.1 |
not_not |
0.595375722 |
III |
Pt019267 |
not found in 90aa |
AT5G39860.1 |
not_not |
0.578034682 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT3G47710.1 MSSRKSRSRQTGASMITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNL
pt023817_POPTR_ MSSRRSRSRQSSSSRISDDQILDLVTKLQQLLPEI-RNRRSDKVSAAKILQETCNYIKSL
pt004762_POPTR_ MSSR--RPRQSSVPRITDDQIIDLVSKLRQLLPEI-SQRRSDKVSASKVLQETCNYIRNL
pt019267_POPTR_ MSSR--RSRQSSVPRITDDQIIHLVSKLRQLLPEI-RQRRSDKVSASKVLQETCNYIKNL
**** *.**:. . *:*:** .** :*::****: :***.****:::*****.**:.*
AT3G47710.1 SKEVDDLSERLSQLLES--TDSAQAALIRSLLMQ
pt023817_POPTR_ HREVGDLSERLSELLET--TDTAQAAIIRNLLMQ
pt004762_POPTR_ HREVDDLSERLSQLLATIDADSPEAAIIRSLIM-
pt019267_POPTR_ HREVDDLSERLSQLLATIDSDSPEAEIIRSLIM-
:**.*******:** : :*:.:* :**.*:*
BoxShade v3.31 C (beta, 970507) Output
AT3G47710.1 |
M |
S |
S |
R |
K |
S |
R |
S |
R |
Q |
T |
G |
A |
S |
M |
I |
T |
D |
E |
Q |
I |
N |
D |
L |
V |
L |
Q |
L |
H |
R |
L |
L |
P |
E |
L |
A |
N |
N |
R |
R |
S |
G |
K |
V |
S |
A |
S |
R |
V |
L |
Q |
E |
T |
C |
S |
Y |
I |
R |
N |
L |
pt023817_POPTR_ |
M |
S |
S |
R |
R |
S |
R |
S |
R |
Q |
S |
S |
S |
S |
R |
I |
S |
D |
D |
Q |
I |
L |
D |
L |
V |
T |
K |
L |
Q |
Q |
L |
L |
P |
E |
I |
- |
R |
N |
R |
R |
S |
D |
K |
V |
S |
A |
A |
K |
I |
L |
Q |
E |
T |
C |
N |
Y |
I |
K |
S |
L |
pt004762_POPTR_ |
M |
S |
S |
R |
- |
- |
R |
P |
R |
Q |
S |
S |
V |
P |
R |
I |
T |
D |
D |
Q |
I |
I |
D |
L |
V |
S |
K |
L |
R |
Q |
L |
L |
P |
E |
I |
- |
S |
Q |
R |
R |
S |
D |
K |
V |
S |
A |
S |
K |
V |
L |
Q |
E |
T |
C |
N |
Y |
I |
R |
N |
L |
pt019267_POPTR_ |
M |
S |
S |
R |
- |
- |
R |
S |
R |
Q |
S |
S |
V |
P |
R |
I |
T |
D |
D |
Q |
I |
I |
H |
L |
V |
S |
K |
L |
R |
Q |
L |
L |
P |
E |
I |
- |
R |
Q |
R |
R |
S |
D |
K |
V |
S |
A |
S |
K |
V |
L |
Q |
E |
T |
C |
N |
Y |
I |
K |
N |
L |
|
AT3G47710.1 |
S |
K |
E |
V |
D |
D |
L |
S |
E |
R |
L |
S |
Q |
L |
L |
E |
S |
- |
- |
T |
D |
S |
A |
Q |
A |
A |
L |
I |
R |
S |
L |
L |
M |
Q |
pt023817_POPTR_ |
H |
R |
E |
V |
G |
D |
L |
S |
E |
R |
L |
S |
E |
L |
L |
E |
T |
- |
- |
T |
D |
T |
A |
Q |
A |
A |
I |
I |
R |
N |
L |
L |
M |
Q |
pt004762_POPTR_ |
H |
R |
E |
V |
D |
D |
L |
S |
E |
R |
L |
S |
Q |
L |
L |
A |
T |
I |
D |
A |
D |
S |
P |
E |
A |
A |
I |
I |
R |
S |
L |
I |
M |
- |
pt019267_POPTR_ |
H |
R |
E |
V |
D |
D |
L |
S |
E |
R |
L |
S |
Q |
L |
L |
A |
T |
I |
D |
S |
D |
S |
P |
E |
A |
E |
I |
I |
R |
S |
L |
I |
M |
- |
|
|